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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
SapurV1A.0179s0200.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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| Family |
GRAS |
| Protein Properties |
Length: 464aa MW: 52437.6 Da PI: 6.3346 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.0179s0200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 317.9 | 2.1e-97 | 83 | 460 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsev 87
l++lLl +A+a ++++ a + L++l + +s gd++qR++ayf+ +Laar++ + s y+ + ++ts +ee+ a++ ++ v
SapurV1A.0179s0200.1.p 83 LIHLLLVIATAADENNVGSAVENLTELYQSVSLIGDSVQRVVAYFADGLAARILTEKSPFYDMIMKEPTS----EEEFLAFTDLYRV 165
689****************************************************9*****988888875....788889999**** PP
GRAS 88 sPilkfshltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLak 167
sP+++f+h+taNqaIlea e+e + +H+iDfd+s+G+QWp+L+q+L++++ ++ slRiTg+g+ s eel+et++rL +
SapurV1A.0179s0200.1.p 166 SPFYQFAHFTANQAILEAYEKEeennsSSLHVIDFDVSYGFQWPSLIQSLSEKAssGNRVSLRITGFGK----SVEELQETESRLVS 248
********************9987777789**********************99755566*********....9************* PP
GRAS 168 fAeel.gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesF 253
fA+ + ++ fef+ l l +l++Lr k++E++aVnlv++l +l +s+++++ +Lk + sl+P +vv+veqe +++s sF
SapurV1A.0179s0200.1.p 249 FAKGVrNLVFEFQGL----LRGSNLSNLRKKKDETVAVNLVFHLNTLK-DSLKISD----TLKSIHSLNPSLVVLVEQEGSRSSRSF 326
**97648*******8....778888*******************9996.8888888....*************************** PP
GRAS 254 lerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqakl 339
l rf+e+l+y++a+fdsl+ lp+es+er ++E+ lg+ei++++ c + + r ++e+W+ r+e GF +++ s+k qakl
SapurV1A.0179s0200.1.p 327 LSRFMESLHYFAAMFDSLDDFLPQESSERLSIEKNHLGKEIKSILNCDKYDaNCPRYDKMETWKGRMEGHGFAAMRPSSKSLIQAKL 413
***********************************************99875789******************************** PP
GRAS 340 llr........kvksdg.....yrveee.sgslv.lgWkdrpLvsvSaW 373
ll+ + +dg ++v e+ +g ++ lgW+dr L+++SaW
SapurV1A.0179s0200.1.p 414 LLKirthycplQ--FDGesgggFKVFERdDGKAIsLGWQDRCLITASAW 460
*98333322221..222333447776543777778************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 464 aa
Download sequence Send
to blast |
MEAIEEEELL NLSLALVTGS NGGDMKRKRK RSREDHVFNP LMNSYEGCSE GKIYRLLQMR 60
EQMINLDHKK KSAVEDSGKR LHLIHLLLVI ATAADENNVG SAVENLTELY QSVSLIGDSV 120
QRVVAYFADG LAARILTEKS PFYDMIMKEP TSEEEFLAFT DLYRVSPFYQ FAHFTANQAI 180
LEAYEKEEEN NSSSLHVIDF DVSYGFQWPS LIQSLSEKAS SGNRVSLRIT GFGKSVEELQ 240
ETESRLVSFA KGVRNLVFEF QGLLRGSNLS NLRKKKDETV AVNLVFHLNT LKDSLKISDT 300
LKSIHSLNPS LVVLVEQEGS RSSRSFLSRF MESLHYFAAM FDSLDDFLPQ ESSERLSIEK 360
NHLGKEIKSI LNCDKYDANC PRYDKMETWK GRMEGHGFAA MRPSSKSLIQ AKLLLKIRTH 420
YCPLQFDGES GGGFKVFERD DGKAISLGWQ DRCLITASAW HCV*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC213423 | 0.0 | AC213423.1 Populus trichocarpa clone POP042-P09, complete sequence. |
