PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0167s0140.3.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bHLH
Protein Properties Length: 329aa    MW: 35412.4 Da    PI: 4.9553
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0167s0140.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH482.3e-15145191455
                             HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                     HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                              hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  SapurV1A.0167s0140.3.p 145 VHNLSEKRRRSRINEKMIALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 191
                             6*************************7.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.9E-19138201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-20138201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.466141190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.46E-13144186No hitNo description
PfamPF000107.9E-13145191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-17147196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MADLYGPARS PANEPEENSS FFQQFLRCNS YSSSSKLNHH ALSTPVETGS AAVELLDCPL  60
FGWSETECGA GAGKSGVNFS DPGGYYVKES VENAVSSGVS KRRGVSAQDD LGDFSCDSEG  120
AEVAEMQANT VRPRSSSKRS RAAEVHNLSE KRRRSRINEK MIALQNLIPN SNKTDKASML  180
DEAIEYLKQL QLQLQMLTMR NGLSLHPMCL PGAPQPMQLP LSGMSFDEGN GLLITNTLKG  240
IFSADEESSV QTALNLPSHC TDSNQPIAVP SGTNITSSEA NFGYEPLIHV NHATFNLCTS  300
SKEICREGIP EAQLEMNQTV RTSPSGVS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0167s0140.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011017183.10.0PREDICTED: transcription factor SPATULA-like isoform X2
TrEMBLA0A3N7FIQ80.0A0A3N7FIQ8_POPTR; Uncharacterized protein
STRINGPOPTR_0002s12600.11e-172(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.13e-31bHLH family protein