PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0141s0260.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | MYB_related | ||||||||
Protein Properties | Length: 782aa MW: 87362.5 Da PI: 6.7932 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.9 | 1.3e-09 | 49 | 91 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I r+++ + q++++++ + SapurV1A.0141s0260.4.p 49 AWTHQEEESFFNALRQVGKN-FEKITRHVQ-SKNKDQVRHYYYRL 91 6*****************99.*********.***********976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 7.48E-12 | 32 | 96 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.6E-6 | 44 | 94 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51293 | 15.001 | 45 | 96 | IPR017884 | SANT domain |
SMART | SM00717 | 1.0E-6 | 46 | 94 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 5.6E-7 | 49 | 91 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 2.42E-6 | 49 | 92 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 782 aa Download sequence Send to blast |
MEPQVSLSSE RHLHRNSSIQ VGDPGVTSST PDCVEPRQPE KRPTRQWAAW THQEEESFFN 60 ALRQVGKNFE KITRHVQSKN KDQVRHYYYR LVRRMNKLLG PRLYLDAKNS KDTNSAMLRW 120 WSLLAKYSCK ASKLHLKPRR FKIFVEALEN QLLKDRRKNV RKRSSQGENG SPTTPSIISN 180 QNRASGHDSR TLKLVLVDSQ NIQKLVVGKG SLKRNVNLGV IRNSIKGDLT AMKPARQRRK 240 PAAYKKWEKA AIAGVSLVAD AAEHLERTAT DKEVEHDEGQ KRLDSVENVL PHLLASLLDY 300 DESSAHNNMK LKLQLFPIDD GTRKALEMDK HNPHLELTLS TRKKISSVLE HLNRKWGNST 360 VASGELMLFP YIVNRENLAG CQRWTQDSLV NAADVYFSIG SPPVFRLRYG WFSNANFASV 420 TLQTPSTYIC LPDGGNEKGK AMDSASTNEP STSDQFLEDP CRECPTSMNS DHASTPNSAE 480 ESNEKNEFIT TRPINNLVKS FDTAANTYWH RTESDDRTST QQLEDVDGLR LSNVNALSAG 540 EWADSLTDVS IGDLLSELPH EADFNCAELP IVQSNQCLQQ IPFSCDSFDA AIAAHISRHQ 600 SKMGFFSSVT SHTSSIWDGE ETCDAFAFQR NHSLPKEVTT SSVASPRAGK QMDRTNSITS 660 SAFLEELPDF VGVMDYPTGE DHMCLSDSQV TNNQAKDFNG LTDIYWTDSL GLPDLDIPSS 720 KYHAEDLIST DSLGGLNHLI ASSLDAFQNC SFFGLNKKDS TSTVEARETT SFSDFKIGSG 780 I* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0141s0260.4.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024460385.1 | 0.0 | TSL-kinase interacting protein 1 isoform X2 | ||||
Swissprot | Q8LJT8 | 0.0 | TKI1_ARATH; TSL-kinase interacting protein 1 | ||||
TrEMBL | A0A3N7F3Z7 | 0.0 | A0A3N7F3Z7_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0006s12730.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36960.3 | 0.0 | TSL-kinase interacting protein 1 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0141s0260.4.p |