PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0141s0260.3.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family MYB_related
Protein Properties Length: 785aa    MW: 87607.8 Da    PI: 6.7932
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0141s0260.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.91.3e-094991347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
         Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                            +WT +E+e + +a +q G++ +++I r+++  +   q++++++ +
  SapurV1A.0141s0260.3.p 49 AWTHQEEESFFNALRQVGKN-FEKITRHVQ-SKNKDQVRHYYYRL 91
                            6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.48E-123296IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.7E-64494IPR009057Homeodomain-like
PROSITE profilePS5129315.0014596IPR017884SANT domain
SMARTSM007171.0E-64694IPR001005SANT/Myb domain
PfamPF002495.6E-74991IPR001005SANT/Myb domain
CDDcd001672.30E-64992No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 785 aa     Download sequence    Send to blast
MEPQVSLSSE RHLHRNSSIQ VGDPGVTSST PDCVEPRQPE KRPTRQWAAW THQEEESFFN  60
ALRQVGKNFE KITRHVQSKN KDQVRHYYYR LVRRMNKLLG PRLYLDAKNS KDTNSAMLRW  120
WSLLAKYSCK ASKLHLKPRR FKIFVEALEN QLLKDRRKNV RKRSSQGENG SPTTPSIISN  180
QNRASGHDSR TLKLVLVDSQ NIQKLVVGKG SLKRNVNLGV IRNSIKGDLT AMKPARQRRK  240
PASSAAYKKW EKAAIAGVSL VADAAEHLER TATDKEVEHD EGQKRLDSVE NVLPHLLASL  300
LDYDESSAHN NMKLKLQLFP IDDGTRKALE MDKHNPHLEL TLSTRKKISS VLEHLNRKWG  360
NSTVASGELM LFPYIVNREN LAGCQRWTQD SLVNAADVYF SIGSPPVFRL RYGWFSNANF  420
ASVTLQTPST YICLPDGGNE KGKAMDSAST NEPSTSDQFL EDPCRECPTS MNSDHASTPN  480
SAEESNEKNE FITTRPINNL VKSFDTAANT YWHRTESDDR TSTQQLEDVD GLRLSNVNAL  540
SAGEWADSLT DVSIGDLLSE LPHEADFNCA ELPIVQSNQC LQQIPFSCDS FDAAIAAHIS  600
RHQSKMGFFS SVTSHTSSIW DGEETCDAFA FQRNHSLPKE VTTSSVASPR AGKQMDRTNS  660
ITSSAFLEEL PDFVGVMDYP TGEDHMCLSD SQVTNNQAKD FNGLTDIYWT DSLGLPDLDI  720
PSSKYHAEDL ISTDSLGGLN HLIASSLDAF QNCSFFGLNK KDSTSTVEAR ETTSFSDFKI  780
GSGI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0141s0260.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024460382.10.0TSL-kinase interacting protein 1 isoform X1
RefseqXP_024460383.10.0TSL-kinase interacting protein 1 isoform X1
RefseqXP_024460384.10.0TSL-kinase interacting protein 1 isoform X1
SwissprotQ8LJT80.0TKI1_ARATH; TSL-kinase interacting protein 1
TrEMBLA0A2K2A1810.0A0A2K2A181_POPTR; Uncharacterized protein
STRINGPOPTR_0006s12730.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.20.0TSL-kinase interacting protein 1