PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0140s0210.4.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bHLH
Protein Properties Length: 168aa    MW: 18970.9 Da    PI: 4.942
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0140s0210.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000462173954
                            TCHHHHHHHHHHHHHH CS
                     HLH 39 sKaeiLekAveYIksL 54
                            +Ka+i + A++YI++L
  SapurV1A.0140s0210.4.p  2 DKASIIKDAIDYIQEL 17
                            8*************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.67E-5132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508888.626117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.8E-7133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550213.36E-689158No hitNo description
Gene3DG3DSA:3.30.70.2605.3E-490156No hitNo description
CDDcd048731.98E-492155No hitNo description
PROSITE profilePS516718.71193167IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MDKASIIKDA IDYIQELHDQ ERKIQAELTE LESGKLKKNQ GGFDTYDHQE LPVLLRSKKK  60
KIDYQFYDFG GSKISPIELL ELRVNYMGEN TLLVSLTCNK RTDTMVKLCE VFESLGLKII  120
TANITTVSGR VLKTVFIEAD EEEKDQLKLR IEAAIAALND PISPMSM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0140s0210.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU2271633e-57CU227163.1 Populus EST from severe drought-stressed leaves.
GenBankCU2286163e-57CU228616.1 Populus EST from severe drought-stressed leaves.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002325261.21e-108transcription factor bHLH35
SwissprotQ2HIV91e-50BH035_ARATH; Transcription factor bHLH35
TrEMBLB9IN671e-107B9IN67_POPTR; BHLH family protein
STRINGXP_010048564.14e-86(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.15e-53bHLH family protein