PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0135s0580.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 227aa    MW: 25386.4 Da    PI: 10.1419
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0135s0580.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.68.4e-10103144351
                     AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                              +GV++  k+ +W A I++      +k+++lg+ g+ ++Aa ++++a+ 
  SapurV1A.0135s0580.1.p 103 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQDDAAHLYDRAAF 144
                             79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003809.8E-4102159IPR001471AP2/ERF domain
SuperFamilySSF541716.28E-7103147IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.8E-5105149IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
QLNLVVLAGR SSFLTPLPRF FDNGTPPVGS AQNGRSVSVH PLPSDDANLP EEKTIAKVGA  60
GSSNVSASSS SKEQRSQPYP EQPVKRRKRH RRKHVQNQEP CLMRGVYFKN MKWQAAIKVD  120
KKQIHLGTVG SQDDAAHLYD RAAFMCGREP NFELSEEEKQ ELRKFKWDEF LAITRSAINN  180
KKHKRRIGVG LQKRSETTLQ DGDWDGKERL NGFSASEDVE PDSSAS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0135s0580.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002303060.21e-137ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_006386877.11e-137ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_006386878.11e-137ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_024451173.11e-137ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_024451174.11e-137ethylene-responsive transcription factor-like protein At4g13040
TrEMBLB9GQL71e-136B9GQL7_POPTR; ERF family protein
STRINGPOPTR_0002s24750.41e-137(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.12e-47ERF family protein