PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0113s0360.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bHLH
Protein Properties Length: 235aa    MW: 26261.4 Da    PI: 7.5475
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0113s0360.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.3e-11145192455
                             HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                     HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR++i +++  L++++P +    +k   Ka +L + ++YI+sLq
  SapurV1A.0113s0360.2.p 145 SHSLAERARREKISERMKILQDIVPGC----NKVTGKALVLDEIINYIQSLQ 192
                             8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.16E-18139208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.97E-10139196No hitNo description
Gene3DG3DSA:4.10.280.105.5E-18141209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.821141191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-8145192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.3E-11147197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MIRMDPPAMM SEGGPYTLEE IWQFPVNGSG RGQFDLLNLE QRAASSARKR REVDLDVDDS  60
SSSKPTTLSP TNANTNGLLN DCDGKRLKAW GSRDENHQQQ QQQNDSKSEA QPSSGKHVEH  120
KPQPSEPPKQ DYIHVRARRG QATDSHSLAE RARREKISER MKILQDIVPG CNKVTGKALV  180
LDEIINYIQS LQRQVEFLSM KLEAVNLNMN PGIEAFPSKD VSANTLSCCY FKHT*
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the control of petal size, by interfering with postmitotic cell expansion to limit final petal cell size. {ECO:0000269|PubMed:16902407}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0113s0360.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Isoform 1 is up-regulated by PI/AP3, SEP2, SEP3 and AP1, but repressed by AG. {ECO:0000269|PubMed:16902407}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011015840.11e-123PREDICTED: transcription factor BPE-like isoform X1
SwissprotQ0JXE78e-70BPE_ARATH; Transcription factor BPE
TrEMBLA0A385JI831e-113A0A385JI83_POPTO; Big petal
TrEMBLB9HLU01e-113B9HLU0_POPTR; Uncharacterized protein
STRINGPOPTR_0008s19510.11e-114(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.23e-67BIG PETAL P
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]