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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0113s0360.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bHLH | ||||||||
Protein Properties | Length: 263aa MW: 29394.7 Da PI: 6.9567 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.5 | 7.6e-11 | 145 | 192 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++++P + +k Ka +L + ++YI+sLq SapurV1A.0113s0360.1.p 145 SHSLAERARREKISERMKILQDIVPGC----NKVTGKALVLDEIINYIQSLQ 192 8*************************9....677*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.14E-17 | 139 | 208 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.96E-10 | 139 | 196 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 6.8E-18 | 141 | 209 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.821 | 141 | 191 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.4E-8 | 145 | 192 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 7.3E-11 | 147 | 197 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0048446 | Biological Process | petal morphogenesis | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 263 aa Download sequence Send to blast |
MIRMDPPAMM SEGGPYTLEE IWQFPVNGSG RGQFDLLNLE QRAASSARKR REVDLDVDDS 60 SSSKPTTLSP TNANTNGLLN DCDGKRLKAW GSRDENHQQQ QQQNDSKSEA QPSSGKHVEH 120 KPQPSEPPKQ DYIHVRARRG QATDSHSLAE RARREKISER MKILQDIVPG CNKVTGKALV 180 LDEIINYIQS LQRQVEFLSM KLEAVNLNMN PGIEAFPSKD FGQHTFDTTG MAFGSQATRE 240 YNHCTSPEWL HMQVGGGFQR TS* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00207 | DAP | Transfer from AT1G59640 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0113s0360.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011034147.1 | 1e-156 | PREDICTED: transcription factor BPE-like isoform X1 | ||||
Swissprot | Q69WS3 | 1e-72 | BH094_ORYSJ; Transcription factor BHLH094 | ||||
TrEMBL | A0A385JI83 | 1e-148 | A0A385JI83_POPTO; Big petal | ||||
TrEMBL | B9HLU0 | 1e-148 | B9HLU0_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0008s19510.1 | 1e-149 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1171 | 34 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 4e-89 | BIG PETAL P |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0113s0360.1.p |