PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | SapurV1A.0091s0130.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 591aa MW: 64312.3 Da PI: 6.6195 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.1 | 5.2e-10 | 430 | 487 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ + l+++ SapurV1A.0091s0130.1.p 430 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 487 9********************************************9998877666665 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-17 | 426 | 490 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.737 | 428 | 491 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.45E-11 | 430 | 481 | No hit | No description |
Pfam | PF00170 | 9.2E-9 | 430 | 484 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.3E-9 | 430 | 486 | No hit | No description |
CDD | cd14703 | 2.61E-24 | 431 | 480 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 591 aa Download sequence Send to blast |
MGDTEEANSE MIQRLQSSFG TTQSSSTNMV KQPFSLINQI DVSQLNLNST QMRARHFANF 60 AQNFSGDCNK RVGFPPSHPN QIPPISPYSQ IPVPRPVNQQ MGPQSFSLGP THSRSLSQPS 120 SFFCLDSLPP LSPAPFRDSS SPSVSDPIST DVSMEEKDGG SHSLLPPSPF NRGNAPRVAE 180 SLPPRKAHRR SNSDIPFGLA NVLQCSPPLI PSRGSSGLER SMSGRENLGM AKPAQLVKKE 240 WERGGDSNAE GMGERKSEVE VVDDLFSAYM NLDNIDVLNS SGTDEKTGNE NREDLDSRAS 300 GTKTNGGDSS DNEAESSVNE SGGSLPRAGL SSSTEKREGV KRSAGDDIAP TTRHYRSVSM 360 DSFMGKLNFG DESPKLPPSP GTRPGQLSPT NSIDGNAFSL EFGNGEFSGA ELKKIMANEK 420 LSEIALADPK RAKRILANRQ SAARSKERKM RYISELEHKV QTLQTEATTL SAQLTLLQRD 480 SVGLTNQNNE LKFRLQAMEQ QAQLRDALNE ALTAEVRRLK IATAEQGGDS DPPKSMVQQQ 540 LSINPQMFLQ QPRPSQLGMH QLQQQSSASQ INMHQLQQQQ QPQQNGNTAP * |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | SapurV1A.0091s0130.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011037233.1 | 0.0 | PREDICTED: transcription factor RF2a-like | ||||
TrEMBL | A0A2K2AVN7 | 0.0 | A0A2K2AVN7_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0004s17080.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2272 | 34 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-162 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | SapurV1A.0091s0130.1.p |