PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0080s0480.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | NAC | ||||||||
Protein Properties | Length: 281aa MW: 32544.5 Da PI: 8.9215 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 152.6 | 1.8e-47 | 11 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 pGfrFhPt+eel+++yLk+ v g+k++l +vi ++iy+++P++Lp k +e+ewyfF++rd+k+++g r+nr+t++g+Wkatg+d SapurV1A.0080s0480.1.p 11 PGFRFHPTEEELLDFYLKNMVFGRKMRL-DVIGYLNIYRHDPSELPGLSKVGEREWYFFVPRDRKQSSGGRPNRTTQNGFWKATGSD 96 9**************************9.99***************8778899********************************** PP NAM 90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++s ++ +g++ktLvfykgrap+g+ktdW+m+eyrl SapurV1A.0080s0480.1.p 97 RKIVSLsdPKRMIGMRKTLVFYKGRAPRGSKTDWIMNEYRL 137 ***997666778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 53.265 | 9 | 156 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.97E-55 | 10 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-25 | 11 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence Send to blast |
MDEMPLQLDL PGFRFHPTEE ELLDFYLKNM VFGRKMRLDV IGYLNIYRHD PSELPGLSKV 60 GEREWYFFVP RDRKQSSGGR PNRTTQNGFW KATGSDRKIV SLSDPKRMIG MRKTLVFYKG 120 RAPRGSKTDW IMNEYRLPDY SSPLPKDIVL CKIYRKATSL KVLEQRATME EEMRAIHASA 180 SSSSLDTMSF CSQLEEPVLP PVLPSQHLVF KKEIEETDII RYEQPKEIKG STLQLPLGEG 240 KLPQLQVPSK WSMEWNQDPI WSLNSPWLQN LIPYADVLNF * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-44 | 11 | 156 | 17 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0080s0480.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CU224883 | 0.0 | CU224883.1 Populus EST from leave. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002305547.1 | 0.0 | NAC domain-containing protein 22 | ||||
Swissprot | Q10S65 | 2e-92 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A3N7EU84 | 0.0 | A0A3N7EU84_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0004s18860.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6214 | 32 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-106 | NAC domain containing protein 36 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0080s0480.1.p |
Publications ? help Back to Top | |||
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