PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0070s0670.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | EIL | ||||||||
Protein Properties | Length: 662aa MW: 74618.9 Da PI: 5.0433 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 508 | 4.5e-155 | 41 | 425 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvega 87 +el++rmw+d+mll+rlke++k+ ++ ++++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+ga SapurV1A.0070s0670.2.p 41 DELERRMWRDRMLLRRLKEQSKNTEVVDDEVVDNAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGA 127 79******************99865555555******************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH-- CS EIN3 88 sdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWP 174 sd+Lr+WWkekv+fdrngpaaiskyqa++ i+++++++ s++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP SapurV1A.0070s0670.2.p 128 SDNLRGWWKEKVRFDRNGPAAISKYQAEHSIPGKSEDCGP-VVSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWP 213 *************************************976.89******************************************** PP -S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XX CS EIN3 175 tGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvs 261 +e+ww++lgl+kdqg+ppykkphdlkkawkvsvLtavikh+sp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee++ ++++ SapurV1A.0070s0670.2.p 214 IVNEEWWPQLGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHLSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLY 300 *************************************************************************************** PP XX..XXXXXXXXXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXX...............................XXXXXXXXXXXX CS EIN3 262 ah..ssslrkqspkvtlsceqkedve.gkkeskikhvqavktta...............................gfpvvrkrkkkp 314 ++ ++ + +s ++ +s+++++dve ++e++ +++ ++ + + +++krk++ SapurV1A.0070s0670.2.p 301 PDscPPVSAGGSGSFLISDSSDYDVEgADDEPN-VEAEDCNPLDvnlfnmaaaagprdgfmmplapqikgelvetCMGLIQKRKQPA 386 **65446677****************5555555.445555555589***************************998999******** PP XXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS EIN3 315 sesakvsskevsrtcqssqfrgsetelifadknsisqney 354 +e+ ++ +++v + c+ q+++s+++l+f d ++++++++ SapurV1A.0070s0670.2.p 387 GEPHMMVDQKV-YRCEYPQCPYSDSRLGFLDITARNNHQM 425 *******9986.**************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.7E-130 | 41 | 293 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 8.1E-74 | 168 | 303 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.83E-59 | 172 | 296 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 662 aa Download sequence Send to blast |
MGFLNNLDLF SSPPGEMDVV PEPEPEATIE EDYSDEEMDV DELERRMWRD RMLLRRLKEQ 60 SKNTEVVDDE VVDNAKQRQS QEQARRKKMS RAQDGILKYM LKMMEVCKAQ GFVYGIIPEK 120 GKPVSGASDN LRGWWKEKVR FDRNGPAAIS KYQAEHSIPG KSEDCGPVVS TPHTLQELQD 180 TTLGSLLSAL MQHCDPPQRR FPLEKGVSPP WWPIVNEEWW PQLGLPKDQG PPPYKKPHDL 240 KKAWKVSVLT AVIKHLSPDI AKIRKLVRQS KCLQDKMTAK ESATWLAIIN QEEALSRKLY 300 PDSCPPVSAG GSGSFLISDS SDYDVEGADD EPNVEAEDCN PLDVNLFNMA AAAGPRDGFM 360 MPLAPQIKGE LVETCMGLIQ KRKQPAGEPH MMVDQKVYRC EYPQCPYSDS RLGFLDITAR 420 NNHQMKCPYR ANTSQGYGMS NFQINSDKPV VFSLPFPQAK AAAPSQTTSF SVSGLGLPED 480 GQKSISDLMS FYDSNLQRDK NMNPGSASVT GDQNQQQLHE QKLQFHQDRR NVNFMGDQSM 540 QQQQQQQQKF QFQRDYRNAN VIGGQNQQQQ QKFQFQLDDS FYGQGVIVGN NITEVTSMPA 600 NNSAFPSSEI QFDHCKAFDS AFDVNVNDTV ADFRFGSPFT MPPADYSMDP MPKQDAGMWY 660 I* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 4e-81 | 170 | 303 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 4e-81 | 170 | 303 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0070s0670.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT627387 | 0.0 | KT627387.1 Populus x jrtyschensis isolate 20F-pj46-14-1 EIN3-like family protein (EIN3) gene, partial cds. | |||
GenBank | KT627391 | 0.0 | KT627391.1 Populus x jrtyschensis isolate 20F-pj46-1 EIN3-like family protein (EIN3) gene, partial cds. | |||
GenBank | KT627397 | 0.0 | KT627397.1 Populus x jrtyschensis isolate 20F-pj60-6-1 EIN3-like family protein (EIN3) gene, partial cds. | |||
GenBank | KT627399 | 0.0 | KT627399.1 Populus x jrtyschensis isolate 20F-pj67-10-1 EIN3-like family protein (EIN3) gene, partial cds. | |||
GenBank | KT627401 | 0.0 | KT627401.1 Populus x jrtyschensis isolate 20F-pj67-11-1 EIN3-like family protein (EIN3) gene, partial cds. | |||
GenBank | KT627403 | 0.0 | KT627403.1 Populus x jrtyschensis isolate 20F-pj67-1 EIN3-like family protein (EIN3) gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024461972.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_024461973.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A2K1Z9U5 | 0.0 | A0A2K1Z9U5_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0008s01200.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0070s0670.2.p |