PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0054s0330.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family SAP
Protein Properties Length: 464aa    MW: 50818.9 Da    PI: 7.1473
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0054s0330.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP754.86.3e-23014611455
                     SAP   1 mssssssssseseegseggeggdass......gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcs 81 
                             msssssssss +++gs +g+g++ ++      ge+egps+sr+ra+nevwpePfleala+qva+dasr +Grl aa+alanvfqvc+
  SapurV1A.0054s0330.1.p   1 MSSSSSSSSS-NGSGSGNGNGSGGGNyggrrgGEYEGPSRSRPRAINEVWPEPFLEALAAQVALDASRLVGRLVAAQALANVFQVCT 86 
                             6766665554.444444444444444457777******************************************************* PP

                     SAP  82 twravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfa 168
                             twravsrsd lw+rltr iW rt+ll+dtWreeyiyrh+ta+nfr++r  ++ l+fdpadvd++ ++d+l+Crclalsd+yla+Gfa
  SapurV1A.0054s0330.1.p  87 TWRAVSRSDPLWHRLTRGIWGRTNLLHDTWREEYIYRHQTAQNFRSGRAVHFALHFDPADVDDPTNPDSLICRCLALSDRYLACGFA 173
                             *************************************************************************************** PP

                     SAP 169 dGavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgr 255
                             dGavrlfdl+trlh++tf+pqh+drlGrfsravsGi+i+  rlvfatldGdihva+++   +a++rra lG+v++dG+lvdf+G+gr
  SapurV1A.0054s0330.1.p 174 DGAVRLFDLTTRLHARTFRPQHHDRLGRFSRAVSGIIITAVRLVFATLDGDIHVAAVNN--NANPRRARLGEVLSDGVLVDFTGRGR 258
                             **********************************************************9..88************************ PP

                     SAP 256 WwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeer 342
                             WwvGlyaG pGraf++Wd+ tee  f GGsltdPeavmGWh+ltelte+vGrvrvt++e++vaCts+rlvvfdlrn gv+lree+++
  SapurV1A.0054s0330.1.p 259 WWVGLYAGLPGRAFRVWDGITEEPLFEGGSLTDPEAVMGWHTLTELTEFVGRVRVTSQESVVACTSSRLVVFDLRNLGVILREEDFT 345
                             ***********************************************************************************9987 PP

                     SAP 343 ..rGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrgaqrgvlgCvnggyalvyaggvlrvWeiekkeg..ylyslrerv 425
                               rG++v+s+d+ neayv++d rG+a+vrr+++ eevc f+vr   rgvlgC+nggy+l++aggv+rvW+ e+ +   ylys+ er 
  SapurV1A.0054s0330.1.p 346 nrRGILVGSFDVCNEAYVIADGRGNASVRRADTSEEVCGFTVR-PPRGVLGCMNGGYVLTCAGGVIRVWQREHPGRqeYLYSFGERL 431
                             77*****************************************.77**************************987667********* PP

                     SAP 426 gevnalvaddrhvavsssdgtihlldfgaq 455
                             gevnalvad+rhva++s d++ihl+dfgaq
  SapurV1A.0054s0330.1.p 432 GEVNALVADERHVAAASGDTNIHLWDFGAQ 461
                             ****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813839.65E-875125IPR001810F-box domain
Gene3DG3DSA:1.20.1280.503.2E-775154No hitNo description
SuperFamilySSF509986.83E-15151459IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.102.3E-12159240IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.102.3E-12297361IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.102.3E-12398458IPR015943WD40/YVTN repeat-like-containing domain
PROSITE patternPS006780444458IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MSSSSSSSSS NGSGSGNGNG SGGGNYGGRR GGEYEGPSRS RPRAINEVWP EPFLEALAAQ  60
VALDASRLVG RLVAAQALAN VFQVCTTWRA VSRSDPLWHR LTRGIWGRTN LLHDTWREEY  120
IYRHQTAQNF RSGRAVHFAL HFDPADVDDP TNPDSLICRC LALSDRYLAC GFADGAVRLF  180
DLTTRLHART FRPQHHDRLG RFSRAVSGII ITAVRLVFAT LDGDIHVAAV NNNANPRRAR  240
LGEVLSDGVL VDFTGRGRWW VGLYAGLPGR AFRVWDGITE EPLFEGGSLT DPEAVMGWHT  300
LTELTEFVGR VRVTSQESVV ACTSSRLVVF DLRNLGVILR EEDFTNRRGI LVGSFDVCNE  360
AYVIADGRGN ASVRRADTSE EVCGFTVRPP RGVLGCMNGG YVLTCAGGVI RVWQREHPGR  420
QEYLYSFGER LGEVNALVAD ERHVAAASGD TNIHLWDFGA QLE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0054s0330.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC2976960.0KC297696.1 Populus tomentosa SAP gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002321195.10.0transcriptional regulator STERILE APETALA
SwissprotQ9FKH11e-179SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A3N7G1S60.0A0A3N7G1S6_POPTR; Uncharacterized protein
STRINGPOPTR_0014s16440.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-171SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]