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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0051s0250.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
bZIP |
Protein Properties |
Length: 402aa MW: 42370.5 Da PI: 7.0354 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0051s0250.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 70.6 | 2.5e-22 | 304 | 366 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e++++k e+++l +e+
SapurV1A.0051s0250.1.p 304 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNQIKSEYEQLLAEN 366
89*********************************************************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MVSSDLDKNG KEKEAKPPSA APTQEQPSTA SATTVNPDWS GFQAYSPIPP PGFMASSPQA 60 HPYMWGVQHI MPPYGTPPHP YVAMYPHGVY AHPSIPPGSY PFSPFAMPSP NGIAEVSGNT 120 PGSMEADGRP SDVKEKLPIK RSKGSLGSLN MITGKNNEHG KTTGVSANGV YSKSAESGSE 180 GSSEGSDANS QSDSQMKSGG RQDSLEDTSQ NGGSAHGAQN GGHGATSTIM NQTMAVVPIS 240 AASASGALPG PTTNLNIGMD YWGAPASSNA PAIRGKVPSA PVAGGVVSTG SRDGAQSQIW 300 LQDERELKRQ RRKQSNRESA RRSRLRKQAE CDELAQRAEA LKEENASLRS EVNQIKSEYE 360 QLLAENTSLK ERLAKVSGQE DIRAGRNDQH MSNDTQQTGQ T*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 320 | 326 | RRSRLRK |
2 | 320 | 327 | RRSRLRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT2G35530.1 | 1e-162 | basic region/leucine zipper transcription factor 16 |