PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0046s0400.7.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family BES1
Protein Properties Length: 674aa    MW: 75535.2 Da    PI: 6.3339
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0046s0400.7.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8221411.1e-43541941136
                  DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaag 83 
                             gg++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGw v +DGtt++   +gs+p   +++a+ 
  SapurV1A.0046s0400.7.p  54 GGARRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWDVLPDGTTFPsrsQGSRPVgGTSAAVT 140
                             6899*****************************************************************988889999973333333 PP

                  DUF822  84 ssas..aspesslq.sslkssalaspvesysaspksssfpspssldsislasaasl 136
                             ss+s  +s++++   ++ +s   ++ ve   ++++ + +p ps ++   ++  +s 
  SapurV1A.0046s0400.7.p 141 SSSShlVSQQTPPAsLRGVSPGYQTSVEYNTCRMRGVFMPNPSPYNLSANT--QSQ 194
                             33333488888887789999***********************99876554..344 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056876.7E-3856191IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514459.25E-182240672IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.803.2E-199241672IPR013781Glycoside hydrolase, catalytic domain
PfamPF013736.5E-107246663IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.7E-74277291IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.7E-74298316IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.7E-74320341IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060324332IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008425.0E-7403412IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007501.7E-74413435IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.7E-74486505IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.7E-74520536IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.7E-74537548IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.7E-74555578IPR001554Glycoside hydrolase, family 14
PRINTSPR008425.0E-7558568IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007501.7E-74595617IPR001554Glycoside hydrolase, family 14
PRINTSPR008425.0E-7646660IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008425.0E-7661673IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 674 aa     Download sequence    Send to blast
MDMDVKEEDN EENGGKNTVA QIMAGVSGGT TSNSSDNQFQ HQQQFQEQVT TPSGGARRSR  60
PLEEKERTKL RERHRRAITA RILAGLRRHG NYNLRVRADI NDVIAALARE AGWDVLPDGT  120
TFPSRSQGSR PVGGTSAAVT SSSSHLVSQQ TPPASLRGVS PGYQTSVEYN TCRMRGVFMP  180
NPSPYNLSAN TQSQIPAVGE GGEQTESDLH IGGSMDTIND KQIADIPPIP KLPERDFAAT  240
PFIPVYVMLP LGVINMKCEL GDPDGLLKQL KVLKSANVDG IMVDCWWGIV EAHTPQEYNW  300
NGYSRLFQMV RELKLKLQVV MSFHECGGNV GDDVCIPLPH WVAEIGRNNP DIFFTDREGR  360
RNSECLSWGI DKERVLRGRT AVEVYFDYMR SFRAEFDEFF ADGIISMVEV GLGPCGELRY  420
PSFPVKHGWR YPGIGEFQCY DQYLLKSLKK TAEARGHPFW ARGPDNAGFY NSQPPETGFF  480
CEGGDYDGYY GRFFLNWYTR ILVDHGDRVL SLAKLAFEGI QIAVKLSGIH WWYKTASHAA  540
ELTAGFYNPC NRDGYAAIAA MLKRHKAALN FSCSELWMVD QQVDFAEALA DPEGLVWQVL  600
NAAWEVGIPI ASENALPCYD RVTYNKILDN AKPLNDPDGR HFLSFTHHRL SPLLMDRQTF  660
MEFERFVKRM HGS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wdr_A1e-15724267211443Beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0046s0400.7.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002302585.20.0beta-amylase 7 isoform X3
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A3N7ENL00.0A0A3N7ENL0_POPTR; Beta-amylase
STRINGPOPTR_0002s16070.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]