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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0037s0720.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
bZIP |
Protein Properties |
Length: 156aa MW: 17467.5 Da PI: 8.8736 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0037s0720.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 52 | 1.5e-16 | 30 | 88 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++ +r+++NRe+ArrsR RK++ ++eL v++L++eN++ + ++ ++++ +l+s++
SapurV1A.0037s0720.1.p 30 RKRKRMISNRESARRSRMRKQKHLDELVAQVAQLKKENHQIITGINITTQHYLNLESDN 88
6789***************************************************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 156 aa
Download sequence Send
to blast |
MASSSGTSSG SSLIQNSGSE ENLQALMDQR KRKRMISNRE SARRSRMRKQ KHLDELVAQV 60 AQLKKENHQI ITGINITTQH YLNLESDNSI LRAKASELSH RLESLNEIIS LLNSNYGVFG 120 DSNIYNEPPA DSFLTPSNMF YLNQPISASA DMFQY*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 29 | 50 | RKRKRMISNRESARRSRMRKQK |
2 | 42 | 49 | RRSRMRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF146155 | 0.0 | EF146155.1 Populus trichocarpa clone WS0115_N18 unknown mRNA. |
GenBank | EF147315 | 0.0 | EF147315.1 Populus trichocarpa clone WS0122_J03 unknown mRNA. |