PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Function |

Cis-element |

Regulation |

Publication

Basic Information? help Back to Top

TF ID

SapurV1A.0032s0720.5.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

VOZ

Protein Properties

Length: 491aa MW: 54506.1 Da PI: 5.9632

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0032s0720.5.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	428.7	8.4e-132	208	424	2	217
VOZ 2 ppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 ppsaflgpkcalwdc+rpaqg +w+qdycssfh ++alneg+pg++p+lrp+gi+lkdgllf++lsakv+gk+vgipecegaatak SapurV1A.0032s0720.5.p 208 PPSAFLGPKCALWDCSRPAQGgLDWFQDYCSSFHHAVALNEGPPGLSPILRPGGIGLKDGLLFSSLSAKVEGKDVGIPECEGAATAK 294 7****************9648************************************************************ PP VOZ 88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyei 174 spwna+elfdls+l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyei SapurV1A.0032s0720.5.p 295 SPWNAPELFDLSVLKGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYEYEI 381 *********************************************************************************** PP VOZ 175 neldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 n++da+alyrlelk vd+kksakgkv+++s+adlqk++grlta SapurV1A.0032s0720.5.p 382 NNCDACALYRLELKAVDGKKSAKGKVANESVADLQKQMGRLTA 424 ***************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence Send to blast
MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRMVDVAVL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA TSALAAPKLE PNDQRLQVGN 120 NVVFQEGYGV NHGQQEHVFP FVDQCKASPS GDRSMVINSV EGVAQLEYHD FDLPQNSEQN 180 FYTGFNGMDL GEDATHLVSS YLPSMFLPPS AFLGPKCALW DCSRPAQGGL DWFQDYCSSF 240 HHAVALNEGP PGLSPILRPG GIGLKDGLLF SSLSAKVEGK DVGIPECEGA ATAKSPWNAP 300 ELFDLSVLKG ETIREWLFFD KPRRAFESGN RKQRSLPDYT GRGWHESRKQ VMNEFGGLKR 360 SYYMDPQPLN NFEWHLYEYE INNCDACALY RLELKAVDGK KSAKGKVANE SVADLQKQMG 420 RLTAEFPAEH KRAVKGRTKV NSKASVGNVY SGSTRVAPPT NEAYDNGSGP HYDYLTENLG 480 DYYLTQFKKP *

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence Send to blast

MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRMVDVAVL EEQVHQMLRE  60
WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA TSALAAPKLE PNDQRLQVGN  120
NVVFQEGYGV NHGQQEHVFP FVDQCKASPS GDRSMVINSV EGVAQLEYHD FDLPQNSEQN  180
FYTGFNGMDL GEDATHLVSS YLPSMFLPPS AFLGPKCALW DCSRPAQGGL DWFQDYCSSF  240
HHAVALNEGP PGLSPILRPG GIGLKDGLLF SSLSAKVEGK DVGIPECEGA ATAKSPWNAP  300
ELFDLSVLKG ETIREWLFFD KPRRAFESGN RKQRSLPDYT GRGWHESRKQ VMNEFGGLKR  360
SYYMDPQPLN NFEWHLYEYE INNCDACALY RLELKAVDGK KSAKGKVANE SVADLQKQMG  420
RLTAEFPAEH KRAVKGRTKV NSKASVGNVY SGSTRVAPPT NEAYDNGSGP HYDYLTENLG  480
DYYLTQFKKP *

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0032s0720.5.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006377435.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_024437335.1	0.0	transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9N9L2	0.0	B9N9L2_POPTR; Uncharacterized protein
STRING	POPTR_0011s05890.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0032s0720.5.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]