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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0031s0130.7.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
WRKY |
Protein Properties |
Length: 415aa MW: 45640.4 Da PI: 7.9105 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0031s0130.7.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.2 | 2.9e-32 | 64 | 121 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k
SapurV1A.0031s0130.7.p 64 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSN-DGQITEIVYKGTHDHPK 121
8****************************************.***************85 PP
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2 | WRKY | 105 | 4.1e-33 | 229 | 287 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK v+g+++prsYY+Ct agCpv+k ver+++dpk+v +tYeg+Hnhe
SapurV1A.0031s0130.7.p 229 LDDGYRWRKYGQKLVRGNPNPRSYYKCTNAGCPVRKLVERASHDPKAVMTTYEGKHNHE 287
59********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 415 aa
Download sequence Send
to blast |
MVSADMNHQQ SAQCVEVQRQ LQSQSFASSP SVKDELNQMG LSSSGLRASQ SDHKTGSAPT 60 MSSDDGYNWR KYGQKHVKGS EFPRSYYKCT HPNCEVKKLF ERSNDGQITE IVYKGTHDHP 120 KPQPSRRYAS GSVLFTQEER FDKFSSLPSQ DDKSPRVCGQ VSHAIEPDSA PELSPGTTND 180 DTGEGAEDDE DPFLKRRRLD AGGFDVTPVI KPIREPRVVV QTLSEIDILD DGYRWRKYGQ 240 KLVRGNPNPR SYYKCTNAGC PVRKLVERAS HDPKAVMTTY EGKHNHEVPT AKTNSHDTAG 300 PSAGNGTSRT RPDKNETISL HLGVGISSTS ENWSGDQRQA LHAELVGIEN QSSGSSFRIV 360 RASPIAAYYG VLNGGMNQYG SRQIPSEGRR IEIPPLSHSS YPYPQNVGSL LSGP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC208047 | 0.0 | AC208047.1 Populus trichocarpa clone JGIACSB05-H10, complete sequence. |