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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0031s0130.5.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
WRKY |
Protein Properties |
Length: 446aa MW: 48767.9 Da PI: 7.0592 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0031s0130.5.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.1 | 3.2e-32 | 95 | 152 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k
SapurV1A.0031s0130.5.p 95 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSN-DGQITEIVYKGTHDHPK 152
8****************************************.***************85 PP
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2 | WRKY | 104.8 | 4.6e-33 | 260 | 318 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK v+g+++prsYY+Ct agCpv+k ver+++dpk+v +tYeg+Hnhe
SapurV1A.0031s0130.5.p 260 LDDGYRWRKYGQKLVRGNPNPRSYYKCTNAGCPVRKLVERASHDPKAVMTTYEGKHNHE 318
59********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 446 aa
Download sequence Send
to blast |
MVSADMNHQQ SAQCVEVQRQ LQSQSFASSP SVKGEMAVCT NELTLSPPLH MITSGSSAPA 60 EVDSDELNQM GLSSSGLRAS QSDHKTGSAP TMSSDDGYNW RKYGQKHVKG SEFPRSYYKC 120 THPNCEVKKL FERSNDGQIT EIVYKGTHDH PKPQPSRRYA SGSVLFTQEE RFDKFSSLPS 180 QDDKSPRVCG QVSHAIEPDS APELSPGTTN DDTGEGAEDD EDPFLKRRRL DAGGFDVTPV 240 IKPIREPRVV VQTLSEIDIL DDGYRWRKYG QKLVRGNPNP RSYYKCTNAG CPVRKLVERA 300 SHDPKAVMTT YEGKHNHEVP TAKTNSHDTA GPSAGNGTSR TRPDKNETIS LHLGVGISST 360 SENWSGDQRQ ALHAELVGIE NQSSGSSFRI VRASPIAAYY GVLNGGMNQY GSRQIPSEGR 420 RIEIPPLSHS SYPYPQNVGS LLSGP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC208047 | 0.0 | AC208047.1 Populus trichocarpa clone JGIACSB05-H10, complete sequence. |