|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
SapurV1A.0031s0130.4.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
|
Family |
WRKY |
Protein Properties |
Length: 514aa MW: 56419.9 Da PI: 8.3086 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0031s0130.4.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.8 | 3.9e-32 | 163 | 220 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k
SapurV1A.0031s0130.4.p 163 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSN-DGQITEIVYKGTHDHPK 220
8****************************************.***************85 PP
|
2 | WRKY | 104.5 | 5.6e-33 | 328 | 386 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK v+g+++prsYY+Ct agCpv+k ver+++dpk+v +tYeg+Hnhe
SapurV1A.0031s0130.4.p 328 LDDGYRWRKYGQKLVRGNPNPRSYYKCTNAGCPVRKLVERASHDPKAVMTTYEGKHNHE 386
59********************************************************8 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 514 aa
Download sequence Send
to blast |
MRALGHSGIM QLAYILIFYT LKSCLLDLLV LCLKNIFRLI PIVLASQVEP SPTTGTFTNP 60 QTVPGSLSST SYSATSVSST TVGERKSNCF EFRPHARSDM VSADMNHQQS AQCVEVQRQL 120 QSQSFASSPS VKDELNQMGL SSSGLRASQS DHKTGSAPTM SSDDGYNWRK YGQKHVKGSE 180 FPRSYYKCTH PNCEVKKLFE RSNDGQITEI VYKGTHDHPK PQPSRRYASG SVLFTQEERF 240 DKFSSLPSQD DKSPRVCGQV SHAIEPDSAP ELSPGTTNDD TGEGAEDDED PFLKRRRLDA 300 GGFDVTPVIK PIREPRVVVQ TLSEIDILDD GYRWRKYGQK LVRGNPNPRS YYKCTNAGCP 360 VRKLVERASH DPKAVMTTYE GKHNHEVPTA KTNSHDTAGP SAGNGTSRTR PDKNETISLH 420 LGVGISSTSE NWSGDQRQAL HAELVGIENQ SSGSSFRIVR ASPIAAYYGV LNGGMNQYGS 480 RQIPSEGRRI EIPPLSHSSY PYPQNVGSLL SGP*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC208047 | 0.0 | AC208047.1 Populus trichocarpa clone JGIACSB05-H10, complete sequence. |