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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0031s0130.3.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
WRKY |
Protein Properties |
Length: 532aa MW: 57962.1 Da PI: 8.0353 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0031s0130.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.7 | 4.1e-32 | 181 | 238 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k
SapurV1A.0031s0130.3.p 181 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSN-DGQITEIVYKGTHDHPK 238
8****************************************.***************85 PP
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2 | WRKY | 104.5 | 5.9e-33 | 346 | 404 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK v+g+++prsYY+Ct agCpv+k ver+++dpk+v +tYeg+Hnhe
SapurV1A.0031s0130.3.p 346 LDDGYRWRKYGQKLVRGNPNPRSYYKCTNAGCPVRKLVERASHDPKAVMTTYEGKHNHE 404
59********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 532 aa
Download sequence Send
to blast |
MNNVKSHPEV SDGSDQTMPD AGGSARYKLM SPAKLPISRS SCIMISPGLS PTSFLESPVL 60 LSNVKVEPSP TTGTFTNPQT VPGSLSSTSY SATSVSSTTV GERKSNCFEF RPHARSDMVS 120 ADMNHQQSAQ CVEVQRQLQS QSFASSPSVK DELNQMGLSS SGLRASQSDH KTGSAPTMSS 180 DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS NDGQITEIVY KGTHDHPKPQ 240 PSRRYASGSV LFTQEERFDK FSSLPSQDDK SPRVCGQVSH AIEPDSAPEL SPGTTNDDTG 300 EGAEDDEDPF LKRRRLDAGG FDVTPVIKPI REPRVVVQTL SEIDILDDGY RWRKYGQKLV 360 RGNPNPRSYY KCTNAGCPVR KLVERASHDP KAVMTTYEGK HNHEVPTAKT NSHDTAGPSA 420 GNGTSRTRPD KNETISLHLG VGISSTSENW SGDQRQALHA ELVGIENQSS GSSFRIVRAS 480 PIAAYYGVLN GGMNQYGSRQ IPSEGRRIEI PPLSHSSYPY PQNVGSLLSG P*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC208047 | 0.0 | AC208047.1 Populus trichocarpa clone JGIACSB05-H10, complete sequence. |