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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0031s0130.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
WRKY |
Protein Properties |
Length: 563aa MW: 61089.6 Da PI: 7.2575 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0031s0130.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.6 | 4.5e-32 | 212 | 269 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k
SapurV1A.0031s0130.1.p 212 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSN-DGQITEIVYKGTHDHPK 269
8****************************************.***************85 PP
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2 | WRKY | 104.4 | 6.3e-33 | 377 | 435 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK v+g+++prsYY+Ct agCpv+k ver+++dpk+v +tYeg+Hnhe
SapurV1A.0031s0130.1.p 377 LDDGYRWRKYGQKLVRGNPNPRSYYKCTNAGCPVRKLVERASHDPKAVMTTYEGKHNHE 435
59********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 563 aa
Download sequence Send
to blast |
MNNVKSHPEV SDGSDQTMPD AGGSARYKLM SPAKLPISRS SCIMISPGLS PTSFLESPVL 60 LSNVKVEPSP TTGTFTNPQT VPGSLSSTSY SATSVSSTTV GERKSNCFEF RPHARSDMVS 120 ADMNHQQSAQ CVEVQRQLQS QSFASSPSVK GEMAVCTNEL TLSPPLHMIT SGSSAPAEVD 180 SDELNQMGLS SSGLRASQSD HKTGSAPTMS SDDGYNWRKY GQKHVKGSEF PRSYYKCTHP 240 NCEVKKLFER SNDGQITEIV YKGTHDHPKP QPSRRYASGS VLFTQEERFD KFSSLPSQDD 300 KSPRVCGQVS HAIEPDSAPE LSPGTTNDDT GEGAEDDEDP FLKRRRLDAG GFDVTPVIKP 360 IREPRVVVQT LSEIDILDDG YRWRKYGQKL VRGNPNPRSY YKCTNAGCPV RKLVERASHD 420 PKAVMTTYEG KHNHEVPTAK TNSHDTAGPS AGNGTSRTRP DKNETISLHL GVGISSTSEN 480 WSGDQRQALH AELVGIENQS SGSSFRIVRA SPIAAYYGVL NGGMNQYGSR QIPSEGRRIE 540 IPPLSHSSYP YPQNVGSLLS GP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC208047 | 0.0 | AC208047.1 Populus trichocarpa clone JGIACSB05-H10, complete sequence. |