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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
SapurV1A.0015s0380.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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| Family |
C2H2 |
| Protein Properties |
Length: 482aa MW: 52967 Da PI: 7.4083 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.0015s0380.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 15 | 7.3e-05 | 126 | 148 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++Cp+Cg+s+++ ++ +H t+
SapurV1A.0015s0380.1.p 126 FECPICGQSYKSEEEVSTHVETC 148
89*****************9887 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 482 aa
Download sequence Send
to blast |
MDDMKDKFKG LMKKVSSSSS PAKFKGQGRV LGGGGSTPSQ SSSGSTNPLH ARYSQPVNSN 60
PNSKPKPNPS SSLNSSSNSK PLPEKGSNLD QNKPASVNKT TNGFDPFDSL ITTGKRSQNG 120
YSLNVFECPI CGQSYKSEEE VSTHVETCIN NSNANSSVES NDRVVGDGNV VEESSGSELE 180
TCISAYLSAK PLEGSVEVVL RLLRNIVKEP ANAKFRRIRM GNPKIREAVI EVAGGVELLE 240
IVGFGLKEEG GEMWAILEEA PKEERIGLIN KVIRLLEPRK EGQKEPRAEG KPSDAPAETE 300
EQVEPKKVDR QIRVFFSVPE NVAARIELPD SFYSLSAEEI KRETDMRKKK IAESQLLIPK 360
SYKEKQAKAA RKRYKRTIIR IQFPDGVVLQ GVFAPWESTT ALYEFVSSAL KDPGLEFELL 420
HPVAVKRRVI PHFPSVGERV TTLDAEDLVP SYLIKFRPIE TDSSVFTGLC NELLEISEPL 480
N*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ifs_A | 1e-12 | 327 | 456 | 23 | 146 | Tether containing UBX domain for GLUT4 |
| 5ifs_C | 1e-12 | 327 | 456 | 23 | 146 | Tether containing UBX domain for GLUT4 |
| 5ifw_A | 4e-13 | 327 | 456 | 23 | 146 | Tether containing UBX domain for GLUT4 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Facilitates the interaction of SYP31 and CDC48A, thereby regulating an CDC48A membrane-associated function (Ref.8). Appears to act as a negative regulator mediating the powdery mildew-plant interaction (PubMed:19176722, PubMed:23301616). {ECO:0000269|PubMed:19176722, ECO:0000269|PubMed:23301616, ECO:0000269|Ref.8}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced in response to powdery mildew and by benzothiadiazole (BTH) treatment. {ECO:0000269|PubMed:19176722}. |
| Publications
? help Back to Top |
- Suzuki T,Park H,Till EA,Lennarz WJ
The PUB domain: a putative protein-protein interaction domain implicated in the ubiquitin-proteasome pathway.
Biochem. Biophys. Res. Commun., 2001. 287(5): p. 1083-7
[PMID:11587532] - Rancour DM,Park S,Knight SD,Bednarek SY
Plant UBX domain-containing protein 1, PUX1, regulates the oligomeric structure and activity of arabidopsis CDC48.
J. Biol. Chem., 2004. 279(52): p. 54264-74
[PMID:15498773] - Chandran D,Rickert J,Cherk C,Dotson BR,Wildermuth MC
Host cell ploidy underlying the fungal feeding site is a determinant of powdery mildew growth and reproduction.
Mol. Plant Microbe Interact., 2013. 26(5): p. 537-45
[PMID:23301616]
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