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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
SapurV1A.0015s0210.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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| Family |
GRAS |
| Protein Properties |
Length: 592aa MW: 64992.3 Da PI: 5.7334 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.0015s0210.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 439.4 | 2.6e-134 | 234 | 586 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsev 87
lv+lL++cA+av+++++ l +al++++ la +++ a+yf+eALa+r+++ l p+++++++ s+ l++ f+e+
SapurV1A.0015s0210.1.p 234 LVHLLMACAKAVQESNFPLGEALVKQIGILAVSQAG-----ATYFAEALARRIYK--------LCPQNSTDHSLSDILQI--HFYET 305
68****************************888776.....68************........66666665566666555..4**** PP
GRAS 88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgv 174
+P+lkf+h+taNqaIlea+eg++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p++++++ l+e+g++La++Ae+++v
SapurV1A.0015s0210.1.p 306 CPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAHDNTDHLQEVGWKLAQLAETIHV 392
*************************************************************************************** PP
GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleal 261
+fe++ +va++l+dl+ ++L+++p E +aVn+vl+lh+ll++++++e+ vL++vk+++P++v+vveqea+hn++ Fl+rf+e+l
SapurV1A.0015s0210.1.p 393 EFEYRGFVANSLADLDASMLELRPTEHVAVNSVLELHKLLARPGAIEK----VLSVVKQMKPEIVTVVEQEANHNGPIFLDRFTESL 475
************************************************....*********************************** PP
GRAS 262 eyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sd 347
+yys+lfdsle + +s +++ +++++lg++i+nvvaceg +r+erhe+l +Wr rl++aGF pv+l+++a kqa++ll+ ++ +d
SapurV1A.0015s0210.1.p 476 HYYSTLFDSLEGS---ASTQDKIMSEVYLGKQICNVVACEGLDRVERHENLTQWRTRLGSAGFAPVHLGSNAFKQASMLLALFAgGD 559
***********99...69999****************************************************************** PP
GRAS 348 gyrveeesgslvlgWkdrpLvsvSaWr 374
gyrvee++g+l+lgW++rpL+++SaWr
SapurV1A.0015s0210.1.p 560 GYRVEENNGCLMLGWHTRPLIATSAWR 586
**************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010218 | Biological Process | response to far red light |
| GO:0042176 | Biological Process | regulation of protein catabolic process |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 592 aa
Download sequence Send
to blast |
MKREHPNLHP QQLSEPSSLA AAGYSTSTST SAMAPHTGKA KIWDEGESQQ ADGGMDELLA 60
VLGYKVRSSD MAEVAQKLEQ LEQVMGHAQE DVLSCLGSDS VHYNPSDLST WLESMISELN 120
PNLNLDPSSD SLLAPAESST ITSIDFSDHK HHRQPKLFEE SLSSEYDLKV IPGRAAFSQT 180
QIDSRESKRL KTDLYQTSSS SSSSSATTIG SFGVSTESTR PVVLVDSQEN GIRLVHLLMA 240
CAKAVQESNF PLGEALVKQI GILAVSQAGA TYFAEALARR IYKLCPQNST DHSLSDILQI 300
HFYETCPYLK FAHFTANQAI LEAFEGKKRV HVIDFSMNQG MQWPALMQAL ALRPGGPPAF 360
RLTGIGPPAH DNTDHLQEVG WKLAQLAETI HVEFEYRGFV ANSLADLDAS MLELRPTEHV 420
AVNSVLELHK LLARPGAIEK VLSVVKQMKP EIVTVVEQEA NHNGPIFLDR FTESLHYYST 480
LFDSLEGSAS TQDKIMSEVY LGKQICNVVA CEGLDRVERH ENLTQWRTRL GSAGFAPVHL 540
GSNAFKQASM LLALFAGGDG YRVEENNGCL MLGWHTRPLI ATSAWRLNTN R*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX102471 | 0.0 | JX102471.1 Populus tomentosa DELLA domain GRAS family transcription factor GAI mRNA, complete cds. |
