 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
SapurV1A.0012s0500.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
|
| Family |
Dof |
| Protein Properties |
Length: 390aa MW: 43096 Da PI: 8.8516 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.0012s0500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 124.6 | 3.2e-39 | 98 | 157 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
+++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk++
SapurV1A.0012s0500.1.p 98 QQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRV 157
7899******************************************************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 390 aa
Download sequence Send
to blast |
MATGSSPPLS LSSPLSFSII GQNMTRFLFL SFWKRISIER CYFYANKNTT LDVFLFVFLF 60
FYFPFSLVQN QIDEKSLMES TSKLMERRGE EVLSQPQQQQ ALKCPRCDSS NTKFCYYNNY 120
SLSQPRHFCK ACKRYWTRGG TLRNVPVGGG CRKNKRVRRP ASAVDGANNS VSSANPNPQT 180
PTDPISSTSN HINPLFYGLT SSNPSEMDLS FTGRFNSRGY SAVSGYHDLQ PQLNSLALGF 240
SSGIMSADHD ANGFNHTKQI QDVVTSNSLL SSYSNFFGSA TTSTNTTSPT IASLLASSFN 300
QQKSTTRAPN QYQSLTVPFE DLQMSGNSES GIGVKGVKTE HDQNRSSWNV PCQNQIEQVG 360
FSDPSMYWNT TTSVGSWHDP ANMGSSVLL*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KT164738 | 0.0 | KT164738.1 Populus tomentosa clone Potom.011G26508 F-box family protein 1 mRNA, complete cds. |
