PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0009s0320.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | EIL | ||||||||
Protein Properties | Length: 597aa MW: 66905.1 Da PI: 5.4544 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 432.9 | 3.1e-132 | 39 | 410 | 2 | 350 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 l++rmwkd ++lkr+ke++k ++++ a++++k +++++qarrkkm+raQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gas SapurV1A.0009s0320.2.p 39 ALERRMWKDLVKLKRIKEKQKL--AAQQ-AAEKQKPKQTTDQARRKKMARAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGAS 122 589***********99999885..3455.599******************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH--- CS EIN3 89 dsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPt 175 d++raWWkekv+fd+ngpaai+ky+a++l+ ++++++ ++ +++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPt SapurV1A.0009s0320.2.p 123 DNIRAWWKEKVKFDKNGPAAIAKYEAECLAIGEAENS--RNGCSQSALQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPT 207 ********************************99988..6799999***************************************** PP S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXX CS EIN3 176 GkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsa 262 G+e+ww +lgls q+ ppykkphdlkk+wkv+vLtavikhm p+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s SapurV1A.0009s0320.2.p 208 GNEDWWVKLGLSLGQS-PPYKKPHDLKKMWKVGVLTAVIKHMTPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIQQPSI 293 ***************9.9********************************************************************* PP XXX.........XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.....................XXXXXXXXXXXXXXXXX CS EIN3 263 hss.........slrkqspkvtlsceqkedvegkkeskikhvqavktta.....................gfpvvrkrkkkpsesak 319 ++ +q++k +s+++++dv+g ++ + ++++++++ ++ r+r+k+p+e+++ SapurV1A.0009s0320.2.p 294 DNGtsgvtespqGGCRQKKKPAISSDSDYDVNGVDDGVGSVSSKDNRRNqpmdveplshrndiaipvqdkELGGKRRRRKRPREKSS 380 944446766555333499999***********87777778888888888999****************5444444444445555555 PP XXXX......XXXXXXX.XXXXXXXXXXXXX CS EIN3 320 vsskevsrtcqssqfrgsetelifadknsis 350 ++ sr + ++ e+ ++++d n+++ SapurV1A.0009s0320.2.p 381 HADQ-QSRPSLNDECLAVEQTNTLPDINHTD 410 5555.689***************99999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.1E-125 | 39 | 285 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.2E-70 | 160 | 292 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 7.06E-62 | 166 | 288 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 597 aa Download sequence Send to blast |
MGELEEIGAD ICSDIEVDDI RCENIAEKDV SDEEIEAEAL ERRMWKDLVK LKRIKEKQKL 60 AAQQAAEKQK PKQTTDQARR KKMARAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG 120 ASDNIRAWWK EKVKFDKNGP AAIAKYEAEC LAIGEAENSR NGCSQSALQD LQDATLGSLL 180 SSLMQHCDPP QRKYPLEKGV PPPWWPTGNE DWWVKLGLSL GQSPPYKKPH DLKKMWKVGV 240 LTAVIKHMTP DIAKIRRHVR QSKCLQDKMT AKESAIWLGV LSREESLIQQ PSIDNGTSGV 300 TESPQGGCRQ KKKPAISSDS DYDVNGVDDG VGSVSSKDNR RNQPMDVEPL SHRNDIAIPV 360 QDKELGGKRR RRKRPREKSS HADQQSRPSL NDECLAVEQT NTLPDINHTD LQPVEYQMHN 420 TQLENFTSSA LMPVEKGLVG ESSLPQSDFN YYAGVPSTND NSTERIFVDR GPAIYPLGQI 480 SELHHETTYS NIYNPSLDYG TNHDGKHSQM AMNARPEDDR FLIPALHGDG NNLTGEEPHQ 540 LAKDTLPTEQ DTAVDRHFEF DLPDFAINSP FLEMSSFSFD NLFVDPEDDL IQCFGA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 6e-76 | 165 | 296 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 367 | 372 | KRRRRK |
2 | 367 | 373 | KRRRRKR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0009s0320.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC214277 | 0.0 | AC214277.1 Populus trichocarpa clone ACSB1145-L17, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006386099.2 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_024454049.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 0.0 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A2K2BAD4 | 0.0 | A0A2K2BAD4_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0003s22090.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-176 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0009s0320.2.p |
Publications ? help Back to Top | |||
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