PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0006s0790.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | MYB_related | ||||||||
Protein Properties | Length: 195aa MW: 21938.4 Da PI: 4.6008 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.1 | 8.1e-08 | 10 | 34 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Ia++++ gRt++++k+ w+++l SapurV1A.0006s0790.2.p 10 RWSAIAARLP-GRTDNEIKNVWHTHL 34 4*********.************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.997 | 1 | 38 | IPR017930 | Myb domain |
CDD | cd00167 | 8.26E-6 | 2 | 34 | No hit | No description |
SuperFamily | SSF46689 | 9.79E-8 | 9 | 42 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 4.2E-12 | 10 | 35 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 5.1E-6 | 10 | 34 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009733 | Biological Process | response to auxin | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence Send to blast |
MDRILVCFFR WSAIAARLPG RTDNEIKNVW HTHLKKRLEQ NHLAPEINGR SIDVSRFNHE 60 FKTGPETVSS SNVVAAGCDQ IQEHRPVSPQ RCSSDISSVT TVETSNNTCA KIENSDDFHE 120 MDEVFWSEVL SADNSRMISD LSAIGTEPQL QFPFSPLIID VEQVHAANSN MSDSMDFWYN 180 LFTRAGELPE LPEI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0006s0790.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002302045.1 | 1e-114 | transcription factor MYB14 | ||||
TrEMBL | B9GS15 | 1e-113 | B9GS15_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0002s03960.1 | 1e-113 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 2e-19 | myb domain protein 14 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0006s0790.2.p |