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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
SMil_00030087-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
NAC |
| Protein Properties |
Length: 159aa MW: 18682.4 Da PI: 10.1027 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00030087-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 174.1 | 4e-54 | 11 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
lp+G+rF+Ptdeel+++yL+ k+++++ e+ +vi+e+d++k+ePwdLp + v+++++ew+fF+++d+ky++g+r nrat++gyWkat
SMil_00030087-RA_Salv 11 LPVGYRFRPTDEELIDHYLRLKINRRDKEV-SVIREIDVCKWEPWDLPdlSVVESTDNEWFFFCPKDRKYQNGQRLNRATEKGYWKAT 97
799************************999.99**************96447888999****************************** PP
NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
gkd++++++kg ++g+kktLvfy grap+g++t+Wv+heyr+
SMil_00030087-RA_Salv 98 GKDRNITTRKGVKIGMKKTLVFYMGRAPDGKRTNWVIHEYRA 139
****************************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 159 aa
Download sequence Send
to blast |
LSMAVLPVKA LPVGYRFRPT DEELIDHYLR LKINRRDKEV SVIREIDVCK WEPWDLPDLS 60
VVESTDNEWF FFCPKDRKYQ NGQRLNRATE KGYWKATGKD RNITTRKGVK IGMKKTLVFY 120
MGRAPDGKRT NWVIHEYRAT DKSLDGTHPG QVRTSFYAL
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-43 | 10 | 143 | 16 | 146 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-43 | 10 | 143 | 16 | 146 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-43 | 10 | 143 | 16 | 146 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-43 | 10 | 143 | 16 | 146 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 3e-43 | 10 | 143 | 16 | 146 | NAC domain-containing protein 19 |
| 4dul_B | 3e-43 | 10 | 143 | 16 | 146 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cold, heat and drought stresses. {ECO:0000269|PubMed:17158162}. |
