 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
SMil_00029368-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
bHLH |
| Protein Properties |
Length: 237aa MW: 26728.7 Da PI: 9.4435 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00029368-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 20.8 | 6.8e-07 | 187 | 213 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
HLH 4 ahnerErrRRdriNsafeeLrellPka 30
+h+ +Er RR++i +++ L++l+P +
SMil_00029368-RA_Salv 187 SHSLAERARREKISERMKILQDLVPGC 213
8************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MYSQSEPERV VHHRSYVYRD REATHLCLPL FLLIVDDVQE FIGLEKPFIE YSFQDYNAGL 60
SLYGDKAKPK TYAARFATPD GHASFQLLGG VVGALVYIFP EFVIQIYAPG LWILAEGQII 120
REIAIKQNER RNEGDSKRMK AVGELKVEGE GNSGKGAAAV ERRSKLDELP KQDYIHVRAR 180
RGQATDSHSL AERARREKIS ERMKILQDLV PGCNKVRAAI KVKASVIICF TSSRKSC
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KP257443 | 0.0 | KP257443.1 Salvia miltiorrhiza clone 10 basic helix-loop-helix transcription factor mRNA, complete cds. |
