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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00028974-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 200aa MW: 23239.6 Da PI: 10.3508 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.1 | 1.2e-10 | 58 | 116 | 4 | 62 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +k+ rr +NR++A+rsR +K ++i e++v eLe + L ++e+ k++ l+ + SMil_00028974-RA_Salv 58 RKKLRRTVSNRLSAQRSRVKKAQYIHDMERRVTELEDTITVLTLRVERFKEKRRLLQLQ 116 799*********************************************99998766655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-8 | 51 | 114 | No hit | No description |
SMART | SM00338 | 2.3E-7 | 54 | 119 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.829 | 57 | 120 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-8 | 58 | 117 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.1E-9 | 59 | 109 | No hit | No description |
CDD | cd14703 | 9.72E-10 | 60 | 111 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 62 | 77 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MQVQSKVEAQ AKANESSNNK ATSIFDAPAE TRKATLNLDK AIEYELKHGR KLDPRMDRKK 60 LRRTVSNRLS AQRSRVKKAQ YIHDMERRVT ELEDTITVLT LRVERFKEKR RLLQLQNEAL 120 ERLVQIRLNE ANLAQMVLEK NKAELGRLKE VEKGLVKELH IQAAAAWNCG QQSSSGFYQD 180 EQLLQKQPQL QMDPFLNFEP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011080726.1 | 2e-44 | uncharacterized protein LOC105163901 | ||||
TrEMBL | A0A4D9AQG1 | 1e-69 | A0A4D9AQG1_SALSN; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7615 | 19 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 2e-13 | bZIP family protein |