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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SMil_00027708-RA_Salv |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family |
WRKY |
Protein Properties |
Length: 578aa MW: 63387.6 Da PI: 6.1709 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00027708-RA_Salv | genome | NDCTCM | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.3 | 1e-30 | 426 | 484 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
SMil_00027708-RA_Salv 426 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 484
699************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009555 | Biological Process | pollen development |
GO:0009793 | Biological Process | embryo development ending in seed dormancy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 578 aa
Download sequence Send
to blast |
MCSHYLLKKK KKKRKMENYQ GDLTDIIRAT GGAETPAAAP DWHFPANPIT FSTNPADDFG 60 DPFAHLRDPL IHIDAPPPLP GFFHGSDVIK PSSVDDSNLG HKIIDDEMKR PPNIFSRMLQ 120 ISPSPKLPLP LPLPCDSPVV VAPTGLKGVA PMLVPNDHTL ISPSNSRGCL MESSLQISSP 180 RNTGIRRSSP SSLSLFNIIS LPFQPSLSLS LVGCPLLVEE EEEEEEDGEF QGDLTDIIRA 240 TGGAETPAAA PDWHFPANPI TFSTNPADDF GDPFAHLRDP LIHIDAPPPL PGFFHGSDVI 300 KPSSVDDSNL GHKIIDDEMK RPPNIFSRML QISPTPKPPL QLPLPCDSPV VVAPTGLKGV 360 APMLVPNDHT LISPSNSRGC LMESSLQISS PRNTGIRRRK SQAKKVVCIP APAPANSRPS 420 GEIVPSDLWA WRKYGQKPIK GSPYPRGYYR CSSSKGCSAR KQVERSRTDP NMLVITYTSE 480 HNHPWPTQRN ALAGSTRSQP SKKSINPKEE QKESGVKEEV DNNEQSYKPA LPESQDSFFA 540 EIEADSLDML FTQGFDDRDT KALDPFGFYD WGHDHTDS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 6 | 14 | LKKKKKKRK |
2 | 8 | 14 | KKKKKRK |
3 | 8 | 15 | KKKKKRKM |
4 | 9 | 14 | KKKKRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM823163 | 0.0 | KM823163.1 Salvia miltiorrhiza WRKY protein (WRKY40) mRNA, complete cds. |