PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00026861-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 413aa    MW: 46521.4 Da    PI: 8.6658
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00026861-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.33.8e-14176231358
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                            + kr rr+++NRe+ArrsR+RK+a + e e+ v +L  eN +L k+   +++++++
  SMil_00026861-RA_Salv 176 DAKRMRRMISNRESARRSRRRKQAHMSERETQVSQLRVENASLLKRFTDINQKYSE 231
                            68********************************************9999999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.8E-11171228No hitNo description
SMARTSM003383.0E-16174238IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.875176231IPR004827Basic-leucine zipper domain
PfamPF001704.3E-12177230IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.41E-9178228No hitNo description
PROSITE patternPS000360181196IPR004827Basic-leucine zipper domain
PfamPF124983.7E-21245311IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MNRSASEWAF QRFLQEATSP DHNITTLPTD DVVKIKANHH HRNDNQQQPQ PAAAPQLNIR  60
IDPEEYQALL KSRLELACAA VALTRATNGK ALESDAAIAA DIGSQVSNSA SSKANGRDSS  120
KIQVEDFSEP VGVPTVLSIS TKSVAQVRST TSGSSGDQSD DDEAETEATQ NMDPADAKRM  180
RRMISNRESA RRSRRRKQAH MSERETQVSQ LRVENASLLK RFTDINQKYS ESAVDNRVLK  240
ADVETLRAKV KMAEESVKRV TGLNSLFHAM SEISTTGMQS FARSPETSAD AAVPIQDQRY  300
YQSPSNNHLT NLRIQNDEVR FCQRRMYHQT RLQPLGVTRW EEAFLCRDWV TWTICRITAV  360
KEQVPLVLEE LENSKASSKM VTVMLSAKLV LSYLRLCCFF VWKKTHSCLH FFV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190197RRSRRRKQ
2192197SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091948.11e-140light-inducible protein CPRF2
SwissprotQ990903e-82CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A4D9BBH21e-149A0A4D9BBH2_SALSN; Uncharacterized protein
STRINGMigut.N01912.1.p1e-117(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29342444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.13e-52bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]