 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
SMil_00026337-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
bHLH |
| Protein Properties |
Length: 223aa MW: 25636.1 Da PI: 9.0253 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00026337-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 28.5 | 2.8e-09 | 66 | 117 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++++h e Er+RR+++ + ++ L +llP+ + ++K + ++A +Ik++
SMil_00026337-RA_Salv 66 KKVMHRELERKRRQEMSHLYASLSSLLPHhQ---IKGKHGVCDQIQEAASHIKKM 117
6899*************************55...999999999999999999987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MFPNHHELGF GTPTTTSQGF QIGQDTDYNF LENNLISFSI GTNDTEVSRR KDLELHGKTK 60
KESSSKKVMH RELERKRRQE MSHLYASLSS LLPHHQIKGK HGVCDQIQEA ASHIKKMEKK 120
IEELKIRRNK LNGDVETSNG IYNNVIINIV ADGMEIIISH SSERSDLGLS RVLAELQWRE 180
FDVISSVSTR MKDRFVHKIQ VEARDISNLD VLMLRDRLTE AIK
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KP257536 | 0.0 | KP257536.1 Salvia miltiorrhiza clone 103 basic helix-loop-helix transcription factor mRNA, complete cds. |
