 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
SMil_00026151-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
bHLH |
| Protein Properties |
Length: 274aa MW: 30443.5 Da PI: 7.6956 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00026151-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 29.9 | 1e-09 | 53 | 104 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
+++ah+ +E++RR+++ ++ Lr+llP ++K ++ +Av+Y++++
SMil_00026151-RA_Salv 53 KKTAHKFIEKQRRQEMTALYASLRSLLPLqY---VKGKRAVSDHMHQAVNYVNDM 104
799**************************66...9999999**********9876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MFPISSDGVS EDPSIFLELE DLLADCPIPQ GNQNTEKKRP RKFASTRSQD DSKKTAHKFI 60
EKQRRQEMTA LYASLRSLLP LQYVKGKRAV SDHMHQAVNY VNDMKMNIEQ LQKRRDKLRN 120
ITTSAAADDD GDPNTTVNGH DCVKITLFRD GIEILITHSP NDNIFPLSKV LADLLDRQLN 180
VVHCVSTTTS HSTFLQTIHI EVATENVAVP AGFERERGAT SGSAAQPLFP GEEGHRRPPL 240
FPLSPKLGAA SLKSPPPSEP ETLRYRLPQI AASL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KP257532 | 0.0 | KP257532.1 Salvia miltiorrhiza clone 99 basic helix-loop-helix transcription factor mRNA, complete cds. |
