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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
SMil_00025868-RA_Salv |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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| Family |
HD-ZIP |
| Protein Properties |
Length: 171aa MW: 19189.8 Da PI: 7.0935 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00025868-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 53 | 6e-17 | 3 | 55 | 5 | 57 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
++++eq++ Le+ F +++ e++ +LA+ lg++ rq+ +W+qN+Ra++k+
SMil_00025868-RA_Salv 3 KRLNQEQVRLLEASFDAGKKLEPERKFQLARDLGVPPRQIAIWYQNKRARWKN 55
4689***********************************************95 PP
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| 2 | HD-ZIP_I/II | 103.3 | 2e-33 | 2 | 92 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
k+rl++eqv+lLE sF++ +kLeperK +lar+Lg+ prq+a+W+qn+RAR+k++ lE d+ a++ ++da +e+++Lek+v+ L+ elk
SMil_00025868-RA_Salv 2 KKRLNQEQVRLLEASFDAGKKLEPERKFQLARDLGVPPRQIAIWYQNKRARWKNQSLELDHGAIQVRLDAALAEKRELEKQVDMLQVELK 91
99************************************************************************************9998 PP
HD-ZIP_I/II 93 e 93
+
SMil_00025868-RA_Salv 92 R 92
6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009646 | Biological Process | response to absence of light |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 171 aa
Download sequence Send
to blast |
MKKRLNQEQV RLLEASFDAG KKLEPERKFQ LARDLGVPPR QIAIWYQNKR ARWKNQSLEL 60
DHGAIQVRLD AALAEKRELE KQVDMLQVEL KRAQDMLFGF RQAQAQAAGR GGPPVSSLSS 120
CCDEGGGSSS LNDDVGCSAN WPNVEELYAC LMAKGPNCPV SEVVNERDYW V
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