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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
SMil_00025757-RA_Salv |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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| Family |
NAC |
| Protein Properties |
Length: 402aa MW: 44989.8 Da PI: 5.0535 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00025757-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 168.7 | 1.9e-52 | 32 | 159 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
l+pGfrFhPtdeelv +yL++kv gk++++ ++++e+d+yk+ePw+L + ++k+++ ewyfFs+ d+ky +g+r nrat +gyWkat
SMil_00025757-RA_Salv 32 LAPGFRFHPTDEELVRYYLRRKVCGKPFRF-QAVTEIDVYKSEPWELAEysSLKTRDLEWYFFSPVDRKYGNGSRLNRATGKGYWKAT 118
579*************************99.88**************84346777888****************************** PP
NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
gkd++v + k++ +g+kktLvf++grap+g++t+Wvmheyrl
SMil_00025757-RA_Salv 119 GKDRSVRH-KNQSIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 159
********.8999***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 402 aa
Download sequence Send
to blast |
LGMEMGQEVV VAAVGSSAAP SPRMGAPPPT SLAPGFRFHP TDEELVRYYL RRKVCGKPFR 60
FQAVTEIDVY KSEPWELAEY SSLKTRDLEW YFFSPVDRKY GNGSRLNRAT GKGYWKATGK 120
DRSVRHKNQS IGMKKTLVFH SGRAPDGKRT NWVMHEYRLC DSELETAGIL QDAFVLCRIF 180
QKSGLGPPNG DRYAPFIEEE WDEDAPLVIP GGDVEDDVAN GDEVRGECMD LDQDTQPLSI 240
APPLVKYPVE STCIPFLCKR ERAAVDPEPL SLDHSKRSKH DDPNSSNANG SEDSTTTSQD 300
PSSMMMMTKI NSSPLEFPLL ETLGSKDNLP ANAPTFDSAN LEKSVPPGYL KFISNLENEI 360
LNISMEKETL KIEVMRAQAM INILQSRVES LTKENEDCRR RA
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-51 | 31 | 182 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-51 | 31 | 182 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-51 | 31 | 182 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-51 | 31 | 182 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 4e-51 | 31 | 182 | 19 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 4e-51 | 31 | 182 | 19 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 4e-51 | 31 | 182 | 19 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 4e-51 | 31 | 182 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 4e-51 | 31 | 182 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 4e-51 | 31 | 182 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 4e-51 | 31 | 182 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 4e-51 | 31 | 182 | 19 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 4e-51 | 31 | 182 | 16 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 4e-51 | 31 | 182 | 16 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional repressor that binds to the motif 5'-(C/T)A(C/A)G-3' in the promoter of target genes (PubMed:25578968). Binds also to the 5'-CTTGNNNNNCAAG-3' consensus sequence in chromatin (PubMed:26617990). Can bind to the mitochondrial dysfunction motif (MDM) present in the upstream regions of mitochondrial dysfunction stimulon (MDS) genes involved in mitochondrial retrograde regulation (MRR) (PubMed:24045019). Together with NAC051/NAC052 and JMJ14, regulates gene expression and flowering time by associating with the histone demethylase JMJ14, probably by the promotion of RNA-mediated gene silencing (PubMed:25578968, PubMed:26617990). {ECO:0000269|PubMed:24045019, ECO:0000269|PubMed:25578968, ECO:0000269|PubMed:26617990}. |
