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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
SMil_00025063-RA_Salv |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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| Family |
HD-ZIP |
| Protein Properties |
Length: 233aa MW: 26689.6 Da PI: 7.5926 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00025063-RA_Salv | genome | NDCTCM | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.5 | 2.6e-19 | 66 | 118 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ ++++eqle Le+ F+++ ++ +++ +LAk+lgL+ rq+ +WFqNrRa++k
SMil_00025063-RA_Salv 66 KKRLSNEQLELLENSFHEEIKLEPDRKMKLAKELGLQPRQIAIWFQNRRARWK 118
5569************************************************9 PP
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| 2 | HD-ZIP_I/II | 122.6 | 1.9e-39 | 65 | 155 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
kk+rls+eq++lLE+sF+ee kLep+rK++la+eLglqprq+a+WFqnrRAR+k k+lE+ y+aLk++yda+++++++L++ev +Lr+
SMil_00025063-RA_Salv 65 KKKRLSNEQLELLENSFHEEIKLEPDRKMKLAKELGLQPRQIAIWFQNRRARWKGKRLEHLYDALKQEYDAVARDKHKLQQEVIALRA 152
9**************************************************************************************8 PP
HD-ZIP_I/II 90 elk 92
lk
SMil_00025063-RA_Salv 153 ILK 155
876 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MDWNGNIKMP YVSRPVDTSN FSSLYNCSFD HFPGLEMKQQ TMLPMIMNKN MNMNMNMNNL 60
GVDPKKKRLS NEQLELLENS FHEEIKLEPD RKMKLAKELG LQPRQIAIWF QNRRARWKGK 120
RLEHLYDALK QEYDAVARDK HKLQQEVIAL RAILKDQVAK KLVLSTGYTD ISGEETVEST 180
SIPSSDNHPP AAAAPVAGLH QIEECNYTLN MADYNNTMAA TPPYWATSMP SCP
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