 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
SMil_00024842-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 308aa MW: 34291.5 Da PI: 8.4816 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00024842-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.5 | 4.8e-18 | 166 | 220 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tk+q Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
SMil_00024842-RA_Salv 166 RKKLRLTKDQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 220
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 127.9 | 4.3e-41 | 166 | 255 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
+kk+rl+k+q+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr
SMil_00024842-RA_Salv 166 RKKLRLTKDQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR 253
69*************************************************************************************9 PP
HD-ZIP_I/II 89 eel 91
+l
SMil_00024842-RA_Salv 254 -AL 255
.55 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MELALSLGDT PKPFSFLEKP QKILSKDLGF CMGTGKVSSD GGEKNKKSDE RRFSDGPNSS 60
DPPVQLDLLP FSPVQRSQPS SNKLPFPWLN DKLGGGSESA SRKGDDDQEA AALSSPNSAV 120
SSFQMDFSMF RSARGKRDFE QFAGEAEADR GASSRGSDDE ENGMARKKLR LTKDQSAFLE 180
ESFKEHNTLN PKQKLALAKQ LNLRPRQVEV WFQNRRARTK LKQTEVDCEY LKRCCETLTE 240
ENRRLQKELQ ELRALKASQP FYMQLPATTL TMCPSCERVV TTTAAASTSN RFSLDPPPPH 300
ACAQNTPS
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 214 | 222 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
