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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SMil_00023584-RA_Salv |
Common Name | WRKY53 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family |
WRKY |
Protein Properties |
Length: 492aa MW: 53544 Da PI: 6.8362 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00023584-RA_Salv | genome | NDCTCM | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97 | 1.3e-30 | 166 | 223 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
+DgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers ++++ei+Y+g+H+h+k
SMil_00023584-RA_Salv 166 EDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-SGHITEIVYKGSHDHPK 223
7****************************************.9**************85 PP
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2 | WRKY | 106.5 | 1.3e-33 | 334 | 392 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
SMil_00023584-RA_Salv 334 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 392
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009611 | Biological Process | response to wounding |
GO:0009961 | Biological Process | response to 1-aminocyclopropane-1-carboxylic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 492 aa
Download sequence Send
to blast |
LNLPGLSGAW KISTVLVPGN YMAEPSPTTG SFFKPQMMQS SGENAAILLE KNFASGNAVD 60 ERTSSGFEFR FHTGVSTTSG LSSAGMSIPV GMNRNGLVTH QDQRYSQSAA PSSLASQSHA 120 VARQDSSVYD NIDESNQGAQ SNTGTQASVS EHKDSSSSVS AERTSEDGYN WRKYGQKLVK 180 GSEFPRSYYK CTYPNCEVKK IFERSPSGHI TEIVYKGSHD HPKPQSARRH NPGALMSIQE 240 DKLDKGLSLA GQEDKMNANN MEQSGSPMLS PLQTNEEGID GSGSQFHGQN DDAEDDDPFL 300 KRRKMEDGTD VTPVVKPIRE PRVVVQTVSE VDILDDGYRW RKYGQKVVRG NPNPRSYYKC 360 TNAGCPVRKH VERASHDPKA VITTYEGKHN HDVPIARNSS HEFAASTAYA GTSKMRAHSI 420 SLDLGVGIGP AAGEQKSQEG LDGEAGAGPT QNNQIYEIVN LYGNREAHNF QTPPINASNQ 480 CQQNLGRILM GP
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM823176 | 0.0 | KM823176.1 Salvia miltiorrhiza WRKY protein (WRKY53) mRNA, complete cds. |