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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SMil_00023510-RA_Salv |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family |
ERF |
Protein Properties |
Length: 261aa MW: 28862.6 Da PI: 9.038 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00023510-RA_Salv | genome | NDCTCM | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 89 | 138 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p + r r++lg+++++e Aa a+++a+ kl+ge
SMil_00023510-RA_Salv 89 YRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDSPEAAAYAYDRAAYKLRGE 138
9******9.**********954...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MSTTHQNTPF FTGNDDADIG LCLSQLILNS NSNTLDSIFS KCYEPGPATG PVLEPLGSSV 60 YLRQRDLINQ FSAVNSRSAL SGPRNGKMYR GVRQRHWGKW VAEIRLPQNR MRVWLGTYDS 120 PEAAAYAYDR AAYKLRGEYA RLNFPNLRDP AGLGLADGPR LDALRSAVDA KIEAVWQKVK 180 REKKARRAAR KLEGKRSESE SGSGVKKADS SESWRASVSG DGLWSGVELP VAAVEEPEMD 240 GCLLARLPSY DLDLIWEVLA T
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC104284 | 2e-46 | AC104284.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OJ1735_C10, complete sequence. |
GenBank | AP014961 | 2e-46 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
GenBank | CP012613 | 2e-46 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
GenBank | CT837611 | 2e-46 | CT837611.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA042N08, full insert sequence. |
GenBank | CT841687 | 2e-46 | CT841687.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C102K07, full insert sequence. |