 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
SMil_00023296-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
bHLH |
| Protein Properties |
Length: 244aa MW: 27866.5 Da PI: 6.8016 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00023296-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 46.2 | 8.3e-15 | 70 | 122 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
++ +hn+ Er RR+++N+ +++Lr+llP+ + +skKls ++ ++ +YI +Lq
SMil_00023296-RA_Salv 70 KKLNHNASERDRRKKMNTLYANLRSLLPPeD---HSKKLSIPATISRVLKYIPELQ 122
6789*************************77...9******************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010106 | Biological Process | cellular response to iron ion starvation |
| GO:0055072 | Biological Process | iron ion homeostasis |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 244 aa
Download sequence Send
to blast |
MLAISPQMCS YGWVMDDPMM SHEQENLSYF SRERTETTSG SIDPHSSPSS KIPLDFNDDF 60
LNGDGDKKVK KLNHNASERD RRKKMNTLYA NLRSLLPPED HSKKLSIPAT ISRVLKYIPE 120
LQREVERLMQ QKERFISKIS MAAENSSLEF KNHTEKPTQR SSNSAASATR INDGQVVIQI 180
SMPKSEKGSI SEAISRLEEE GFLMVNASCF ESFEGRLFYN LHFQAQEGQV IDAEKLKEKV 240
WPLM
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KP257518 | 0.0 | KP257518.1 Salvia miltiorrhiza clone 85 basic helix-loop-helix transcription factor mRNA, complete cds. |
