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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SMil_00023213-RA_Salv |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family |
WRKY |
Protein Properties |
Length: 288aa MW: 32081.5 Da PI: 9.2332 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00023213-RA_Salv | genome | NDCTCM | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.8 | 7.2e-31 | 110 | 168 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYG+K+vk+s++pr+YYrC+ +gCpvkk+ver++edp +v++tYeg Hnh+
SMil_00023213-RA_Salv 110 LDDGFKWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRVERDNEDPLYVVTTYEGIHNHK 168
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MDAPLMIMAD DHSYPIKPGS SLGQAHEPGF EVSDFFEFND WIEEAPSFSS PLSAASYDSQ 60 NPSYTPNAGS SWSSSSSSSS FLEGAITRDS GCGREKEKVA FKTKSEVEVL DDGFKWRKYG 120 KKMVKNSPNP RNYYRCSVEG CPVKKRVERD NEDPLYVVTT YEGIHNHKGP HQATKAWRRR 180 RLCRRSIQSR GRSQFVRKAK GDRGSVRRRR GNNEGEADGW SAEGFLQGGK SWWRSSGERD 240 LLSSRWGGSL GEGRCRPCTT AEGLCSLAGK GCSMGGGGER DRERDHLN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM823166 | 0.0 | KM823166.1 Salvia miltiorrhiza WRKY protein (WRKY43) mRNA, complete cds. |