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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00022961-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 775aa MW: 83715.3 Da PI: 6.5159 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.1 | 1.1e-09 | 286 | 320 | 1 | 35 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekv 35 e++ kr r+ +NRe+A+ sRqRKk ++eeLe+k+ SMil_00022961-RA_Salv 286 EEDEKRKARLLRNRESAQLSRQRKKHYVEELEDKA 320 6788*****************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 3.1E-7 | 287 | 320 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.749 | 288 | 320 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.4E-9 | 290 | 321 | No hit | No description |
SuperFamily | SSF57959 | 1.29E-7 | 290 | 321 | No hit | No description |
CDD | cd14704 | 3.78E-14 | 291 | 320 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 775 aa Download sequence Send to blast |
MAEATVVAVD PPTEPPPDFG DFGCGLQIAP LDDGFFSHHV FNGDGVAGEN GRDDVVVLED 60 LDFDFSFDDL GLPPAEDLDH LLNPSQLRQF HSQPRVDPSF TQVGSNYEQM HSVFKSSSSE 120 LRHLSGDGDF SGNRSCDGSG LMNSTSPDTE SQQISAYLNM PSPESNGSNR GSADNGDGDG 180 KGLNCPSPDS QGSGNFESHV SEDSNNCVAR SVSSSPNSSN SSVRNSVVDQ KIKLEDPASN 240 NSSISLLKRK KEGEDLTHSD SRIKYRKSNC NAENNNSSNS NEGLSEEDEK RKARLLRNRE 300 SAQLSRQRKK HYVEELEDKA TNGWWWWSPA PPAAAPPPMA PPPPGMYTHP AMMYPWMPYA 360 QPYMMKSQGS QVPLVPIPRL KPQQPAQAPK PSRKVEGKKN DGPKTRKVAG VSFLGLLFFI 420 MLFGGLAPMV NVRYGGAREA FTGGESYITG GFSEKHRGRV LMVNGTEFDE IHGGRIDYSS 480 NGSVRHGQRG QASPGDPSAD ESVRLGNGSE PLAASLYVPR NDKLVKIDGN LIIHSVLASE 540 KAMASNRNGG GETGLAVPGD LAPAIPGQDM GRNGARHPLL RALGAADKDG MKSTATDGRL 600 QQWFREGLAG PIGQWTKAVF AICFAYAVIH VRPMLSAGMC TEVFQFDTSA ASASGAIVPA 660 STSRNISEAQ SKNSSKARNR RILHPIPLPE SSHNISGEHT RRRSEKEDLN INKNTSSMVV 720 SVLFDPREVS DAEVDGVMGT KSLSRIFVVV LMDSVRYVTY SCMLPFKAAP HLVTA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020547388.1 | 0.0 | bZIP transcription factor 17 | ||||
TrEMBL | A0A4D8Z365 | 0.0 | A0A4D8Z365_SALSN; Uncharacterized protein | ||||
STRING | Migut.J01624.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3029 | 24 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-115 | bZIP family protein |