 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
SMil_00022792-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
bHLH |
| Protein Properties |
Length: 270aa MW: 29803.4 Da PI: 8.1564 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00022792-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 23.1 | 1.3e-07 | 156 | 202 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
n + RR++i +++ L++l+P + ++ Ka +L + ++YI+sLq
SMil_00022792-RA_Salv 156 NNNVMARREKISERMRILQDLVPGC---NKVSICKALVLDEIINYIQSLQ 202
556667*******************...9999*****************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 270 aa
Download sequence Send
to blast |
LEKHCVCVCA GSSHCTPLRT VLTQQPALFQ GKKIHSICPL PSYTFTHPPV SIHSCSSARP 60
DRRNSLPPPS MDPQGPAMMN EGGVYNFAEI WPAFQMNATA TSYGLGLDPM VMDQRSNHSP 120
PNHNSRKRRE DDDCVKGGAS TSNSNGNSNN TTNNNNNNVM ARREKISERM RILQDLVPGC 180
NKVSICKALV LDEIINYIQS LQRQVEFLSM KLEAVNARVS IDGYPSKDFS QQTFDSSGMA 240
YGSQSTREYG RGSSPEWLHM QIGGGFERSS
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KP257538 | 0.0 | KP257538.1 Salvia miltiorrhiza clone 105 basic helix-loop-helix transcription factor mRNA, complete cds. |
