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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | SMil_00022714-RA_Salv | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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| Family | G2-like | ||||||||
| Protein Properties | Length: 272aa MW: 31584.4 Da PI: 10.0544 | ||||||||
| Description | G2-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | G2-like | 27.9 | 5.2e-09 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55
mk +gLt+ h+kSHLQkYR+
SMil_00022714-RA_Salv 1 MKCDGLTIFHIKSHLQKYRV 20
99*****************7 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:1.10.10.60 | 2.9E-7 | 1 | 21 | IPR009057 | Homeodomain-like |
| Pfam | PF14379 | 1.5E-16 | 41 | 87 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 272 aa Download sequence Send to blast |
MKCDGLTIFH IKSHLQKYRV SELMPEEKEG NSEQVDSKTG MQIVEALRLQ IDVQRQLYEQ 60 LESQKKLQMR IEEQAKQLQT MLQFAHQSKT RFNTLATNKL FSNLKANEFD IQRNKETKKA 120 GVSDEDIPSG SKGAALKASS KEPKKQSNES TELKPEEFFS QYTLLTKRFN KMESKFRKYK 180 KFHKKNFRGN EKEYKPKYSN DKTEEKKSSK YSNDRTDCPE LSHSERKALR AKRDRKYEKK 240 KTMVARDAED SGSSTESSAS NSTSSDDESQ TL |
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA16717 | 4 | 5 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G06800.1 | 3e-30 | G2-like family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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