PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00022226-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 278aa    MW: 31246 Da    PI: 7.3511
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00022226-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.41.1e-11152197550
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                            kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  SMil_00022226-RA_Salv 152 KRIKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 197
                            899**********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.9E-15148212IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.68150202IPR004827Basic-leucine zipper domain
PfamPF001702.9E-10152197IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.0E-14152203No hitNo description
SuperFamilySSF579596.47E-12152206No hitNo description
CDDcd147032.79E-22153203No hitNo description
PROSITE patternPS000360155170IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
LISYQLKCME QLPPKAPISM AAHNWPSFPL QMMPAGNSWM DEFLDFSATR RGAHRRTVSD  60
PIAFVEDAHN HGFDRLDDEQ LRSMFSDDLI ALGSSSNPSS TPSDQNSDDD DKRTAAELHR  120
LHPKPEPGEV DSSGQPPPPQ TKSSDNAPGD PKRIKRILAN RQSAQRSRVR KLQYISELER  180
SVTTLQTEVS ALSPRVAFLD HQRLLLNVDN SAIKQRIAAL AQDKIFKDAH QEALKKEIER  240
LRKVFHEQNM KKNMESNDAP PPAAASPPFS KRGRAEEE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082729.11e-128basic leucine zipper 61
SwissprotQ9M2K44e-94BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A4D9B8T61e-133A0A4D9B8T6_SALSN; Uncharacterized protein
STRINGMigut.M00759.1.p1e-114(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17752465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.26e-78bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]