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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00022226-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 278aa MW: 31246 Da PI: 7.3511 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.4 | 1.1e-11 | 152 | 197 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ SMil_00022226-RA_Salv 152 KRIKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 197 899**********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.9E-15 | 148 | 212 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.68 | 150 | 202 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.9E-10 | 152 | 197 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.0E-14 | 152 | 203 | No hit | No description |
SuperFamily | SSF57959 | 6.47E-12 | 152 | 206 | No hit | No description |
CDD | cd14703 | 2.79E-22 | 153 | 203 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 155 | 170 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence Send to blast |
LISYQLKCME QLPPKAPISM AAHNWPSFPL QMMPAGNSWM DEFLDFSATR RGAHRRTVSD 60 PIAFVEDAHN HGFDRLDDEQ LRSMFSDDLI ALGSSSNPSS TPSDQNSDDD DKRTAAELHR 120 LHPKPEPGEV DSSGQPPPPQ TKSSDNAPGD PKRIKRILAN RQSAQRSRVR KLQYISELER 180 SVTTLQTEVS ALSPRVAFLD HQRLLLNVDN SAIKQRIAAL AQDKIFKDAH QEALKKEIER 240 LRKVFHEQNM KKNMESNDAP PPAAASPPFS KRGRAEEE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011082729.1 | 1e-128 | basic leucine zipper 61 | ||||
Swissprot | Q9M2K4 | 4e-94 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A4D9B8T6 | 1e-133 | A0A4D9B8T6_SALSN; Uncharacterized protein | ||||
STRING | Migut.M00759.1.p | 1e-114 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1775 | 24 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 6e-78 | bZIP family protein |
Publications ? help Back to Top | |||
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