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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
SMil_00020369-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
NAC |
| Protein Properties |
Length: 169aa MW: 18923.5 Da PI: 10.1999 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00020369-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 172.9 | 9.6e-54 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88
lppGfrFhPtdeel+v+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+r++ky++g+r+nra++sgyWkatg+
SMil_00020369-RA_Salv 15 LPPGFRFHPTDEELLVHYLKKKAAAAPLPV-AIIAEVDLYKYDPWELPSKASFGEQEWYFFSPRERKYPNGERPNRAATSGYWKATGT 101
79****************************.88***************988899********************************** PP
NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
dk++l++ ++++ g+kk Lvfy g+ pkg+kt+W+mheyrl
SMil_00020369-RA_Salv 102 DKPILTAnGTQKLGVKKALVFYGGKPPKGVKTNWIMHEYRL 142
*****9867778***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 169 aa
Download sequence Send
to blast |
MEGTSSSGGN HQPRLPPGFR FHPTDEELLV HYLKKKAAAA PLPVAIIAEV DLYKYDPWEL 60
PSKASFGEQE WYFFSPRERK YPNGERPNRA ATSGYWKATG TDKPILTANG TQKLGVKKAL 120
VFYGGKPPKG VKTNWIMHEY RLVGDNSTAN KPPGINLPKK SSSRVYNYI
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 7e-66 | 12 | 143 | 14 | 143 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 7e-66 | 12 | 143 | 14 | 143 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 7e-66 | 12 | 143 | 14 | 143 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 7e-66 | 12 | 143 | 14 | 143 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 8e-66 | 12 | 143 | 17 | 146 | NAC domain-containing protein 19 |
| 3swm_B | 8e-66 | 12 | 143 | 17 | 146 | NAC domain-containing protein 19 |
| 3swm_C | 8e-66 | 12 | 143 | 17 | 146 | NAC domain-containing protein 19 |
| 3swm_D | 8e-66 | 12 | 143 | 17 | 146 | NAC domain-containing protein 19 |
| 3swp_A | 8e-66 | 12 | 143 | 17 | 146 | NAC domain-containing protein 19 |
| 3swp_B | 8e-66 | 12 | 143 | 17 | 146 | NAC domain-containing protein 19 |
| 3swp_C | 8e-66 | 12 | 143 | 17 | 146 | NAC domain-containing protein 19 |
| 3swp_D | 8e-66 | 12 | 143 | 17 | 146 | NAC domain-containing protein 19 |
| 4dul_A | 7e-66 | 12 | 143 | 14 | 143 | NAC domain-containing protein 19 |
| 4dul_B | 7e-66 | 12 | 143 | 14 | 143 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
