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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
SMil_00019580-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
C2H2 |
| Protein Properties |
Length: 305aa MW: 33816.4 Da PI: 8.3023 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00019580-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 10.9 | 0.0014 | 243 | 265 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp C+ +Fs+ L+ H + H
SMil_00019580-RA_Salv 243 VCPQCKLRFSSVGALVDHVEKvH 265
6*****************99888 PP
|
| 2 | zf-C2H2 | 16.5 | 2.3e-05 | 277 | 299 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp+C+k F+++ L+ H + H
SMil_00019580-RA_Salv 277 VCPKCSKGFRDPVKLVEHVEReH 299
7*****************99888 PP
|
| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SuperFamily | SSF118310 | 1.18E-11 | 22 | 76 | No hit | No description |
| Gene3D | G3DSA:4.10.1110.10 | 2.4E-11 | 27 | 72 | IPR000058 | Zinc finger, AN1-type |
| PROSITE profile | PS51039 | 7.687 | 29 | 74 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 2.6E-13 | 32 | 70 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00154 | 1.1E-4 | 32 | 71 | IPR000058 | Zinc finger, AN1-type |
| Gene3D | G3DSA:4.10.1110.10 | 2.9E-11 | 109 | 176 | IPR000058 | Zinc finger, AN1-type |
| SuperFamily | SSF118310 | 3.01E-9 | 112 | 164 | No hit | No description |
| PROSITE profile | PS51039 | 8.114 | 117 | 170 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 3.0E-8 | 120 | 159 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00154 | 0.021 | 120 | 161 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00355 | 0.065 | 242 | 265 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 244 | 265 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 8.642 | 276 | 304 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 5.5 | 276 | 299 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 278 | 299 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
LFFQSQSRIR GFAFFDLNGM GTPAIPNLGK HCSVDDCRQI DFLPFTCDCC QQVFCLDHRS 60
YSRHQCPKAS KNDVTVVVCP LCAKGVRLIP EEDPNITWES HVNVECDPSN YEQATKKRKC 120
PVPRCKEMLT FSNTIKCRDC NIDHCLKHRF GADHSCPGPR KPEPSFQFMG FLNKSRKDEP 180
KQAAATSSSK WASSFLNLAS SVRASAEAGM TKLSNEFNQA LSTNGGAQNS SSTSTSTSHQ 240
VEVCPQCKLR FSSVGALVDH VEKVHERHGV MKATLDVCPK CSKGFRDPVK LVEHVEREHG 300
GVSKA
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | May be involved in environmental stress response. {ECO:0000250}. |
