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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00019310-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 315aa MW: 32756.8 Da PI: 4.968 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.7 | 4.6e-12 | 219 | 272 | 4 | 57 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +++rr++kNRe+A rsR+RK+a++ e e v +Le+e +L e el+ e + SMil_00019310-RA_Salv 219 QQKQRRMIKNRESAARSRERKQAYTVEMEAMVTSLEEEHARLLREEAELNRERY 272 689*************************************99888777777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.8E-13 | 213 | 271 | No hit | No description |
SMART | SM00338 | 2.7E-11 | 216 | 280 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.2E-10 | 218 | 272 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.128 | 218 | 270 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 5.30E-19 | 220 | 267 | No hit | No description |
SuperFamily | SSF57959 | 2.31E-9 | 220 | 271 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 223 | 238 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence Send to blast |
LNFMLMASSR VIASRSPPNS DLPRDSPTSS INIHSDQAAR GFGSMNMDEI FRNIYPDSTS 60 FDNGAAGGEA ASGGGLSSVD GGDGGVRNGG GSKTVEEVWR DIVTGGGGGG GVSGGETAMT 120 LEDFLAKAGA VNEEDVRVPA VVTMPPPPPA VGGFGMEGVM MSPAPGVPAV QFAAAGCVQN 180 VIGVEFGSGM AAVSGSVGGG GRGKRRVAVD EVPLDKATQQ KQRRMIKNRE SAARSRERKQ 240 AYTVEMEAMV TSLEEEHARL LREEAELNRE RYKQCLAVIV DDGKFGSNLV TEREMGNLLQ 300 LVIIAHTLAG GTSGR |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00648 | PBM | Transfer from LOC_Os05g36160 | Download |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020552830.1 | 1e-128 | G-box-binding factor 4-like | ||||
TrEMBL | A0A4D8ZMD7 | 1e-123 | A0A4D8ZMD7_SALSN; ABA responsive element binding factor | ||||
STRING | VIT_12s0055g00420.t01 | 3e-66 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2771 | 24 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 3e-18 | bZIP family protein |