PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00018756-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

bZIP

Protein Properties

Length: 397aa MW: 43338.5 Da PI: 6.9679

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00018756-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.1	5.7e-11	316	374	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK+ +i eLe kv++L++e ++L ++ +k a+l++++ SMil_00018756-RA_Salv 316 KRAKRILANRQSAARSKERKLRYISELEHKVQTLQTEATTLSAQITIVQKDHAELTNQN 374 9**************************************************99999987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.5E-17	312	376	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.622	314	377	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.7E-10	316	374	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.32E-11	316	368	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.6E-10	316	373	No hit	No description
CDD	cd14703	9.09E-23	317	368	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence Send to blast
LLKILGGILL ILMAQTNLKQ SPDQIFGASS HSRSLSQPSF MANNCLPPLS PFPPSESSLA 60 SSNSSLKNMS MEETDVSSRG PAMGLTSPRE NPFRGSGLPP RRGHRRSNSD VPLGFSAMIQ 120 SSPQLVPISS QGGLGQMTNT REKSGNSISA GMNKLEVEEV NYAKSEDMGE RKSEGEVVDN 180 LFQSLMDLDH GDTLNSSGAN GRDRGTLVRG TTIAGGDSNV YESESLKKNA AVAPQIRHFR 240 SLSMDSGIGS FQFGDSPPNL QNSLCNRADQ LSPSNSLSEN LTDINLDFGH GEFNEVELRK 300 IRADDRLAEI AVSDPKRAKR ILANRQSAAR SKERKLRYIS ELEHKVQTLQ TEATTLSAQI 360 TIVQKDHAEL TNQNNELKFR IHAMEQQAQL RDGIMFV

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence Send to blast

LLKILGGILL ILMAQTNLKQ SPDQIFGASS HSRSLSQPSF MANNCLPPLS PFPPSESSLA  60
SSNSSLKNMS MEETDVSSRG PAMGLTSPRE NPFRGSGLPP RRGHRRSNSD VPLGFSAMIQ  120
SSPQLVPISS QGGLGQMTNT REKSGNSISA GMNKLEVEEV NYAKSEDMGE RKSEGEVVDN  180
LFQSLMDLDH GDTLNSSGAN GRDRGTLVRG TTIAGGDSNV YESESLKKNA AVAPQIRHFR  240
SLSMDSGIGS FQFGDSPPNL QNSLCNRADQ LSPSNSLSEN LTDINLDFGH GEFNEVELRK  300
IRADDRLAEI AVSDPKRAKR ILANRQSAAR SKERKLRYIS ELEHKVQTLQ TEATTLSAQI  360
TIVQKDHAEL TNQNNELKFR IHAMEQQAQL RDGIMFV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011074646.1	1e-157	transcription factor RF2b
TrEMBL	A0A4D8ZN93	0.0	A0A4D8ZN93_SALSN; Uncharacterized protein
STRING	XP_009610158.1	1e-133	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1265	24	78

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-76	bZIP family protein