PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00018756-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 397aa MW: 43338.5 Da PI: 6.9679 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.1 | 5.7e-11 | 316 | 374 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK+ +i eLe kv++L++e ++L ++ +k a+l++++ SMil_00018756-RA_Salv 316 KRAKRILANRQSAARSKERKLRYISELEHKVQTLQTEATTLSAQITIVQKDHAELTNQN 374 9**************************************************99999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.5E-17 | 312 | 376 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.622 | 314 | 377 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.7E-10 | 316 | 374 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.32E-11 | 316 | 368 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.6E-10 | 316 | 373 | No hit | No description |
CDD | cd14703 | 9.09E-23 | 317 | 368 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 397 aa Download sequence Send to blast |
LLKILGGILL ILMAQTNLKQ SPDQIFGASS HSRSLSQPSF MANNCLPPLS PFPPSESSLA 60 SSNSSLKNMS MEETDVSSRG PAMGLTSPRE NPFRGSGLPP RRGHRRSNSD VPLGFSAMIQ 120 SSPQLVPISS QGGLGQMTNT REKSGNSISA GMNKLEVEEV NYAKSEDMGE RKSEGEVVDN 180 LFQSLMDLDH GDTLNSSGAN GRDRGTLVRG TTIAGGDSNV YESESLKKNA AVAPQIRHFR 240 SLSMDSGIGS FQFGDSPPNL QNSLCNRADQ LSPSNSLSEN LTDINLDFGH GEFNEVELRK 300 IRADDRLAEI AVSDPKRAKR ILANRQSAAR SKERKLRYIS ELEHKVQTLQ TEATTLSAQI 360 TIVQKDHAEL TNQNNELKFR IHAMEQQAQL RDGIMFV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011074646.1 | 1e-157 | transcription factor RF2b | ||||
TrEMBL | A0A4D8ZN93 | 0.0 | A0A4D8ZN93_SALSN; Uncharacterized protein | ||||
STRING | XP_009610158.1 | 1e-133 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1265 | 24 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-76 | bZIP family protein |