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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SMil_00017834-RA_Salv |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family |
WRKY |
Protein Properties |
Length: 330aa MW: 36326.8 Da PI: 7.8345 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00017834-RA_Salv | genome | NDCTCM | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 92 | 4.6e-29 | 177 | 236 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ YegeHnh
SMil_00017834-RA_Salv 177 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApTCPVKKKVQRSVEDQSILVASYEGEHNHA 236
58***************************99****************************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0002237 | Biological Process | response to molecule of bacterial origin |
GO:0002238 | Biological Process | response to molecule of fungal origin |
GO:0009409 | Biological Process | response to cold |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009611 | Biological Process | response to wounding |
GO:0009623 | Biological Process | response to parasitic fungus |
GO:0009651 | Biological Process | response to salt stress |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
GO:0010200 | Biological Process | response to chitin |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0050691 | Biological Process | regulation of defense response to virus by host |
GO:0050832 | Biological Process | defense response to fungus |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:1990841 | Molecular Function | promoter-specific chromatin binding |
Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
LATAAENIKT TTTIQLIEIF FMEFTSLLNN SLDLNAKPLR FLDESPPLKH QVLESSFIGL 60 GTSVVNVKEE KGALIEELNR VSAENKKLTE LLTVMCENYT ELRNQLVEQT SKNVNGVENS 120 NAASRKRKAE SSNIDALNPE SSSSDEESSK KPREEHIKAK ISRVCVRTEA SDTSLIVKDG 180 YQWRKYGQKV TRDNPCPRAY FKCSFAPTCP VKKKVQRSVE DQSILVASYE GEHNHAPPSK 240 VESNSSGSNK NSNLGSTSVS STAAPTVTLD LTKPKQESTN ATPKLDAPEL QHFFVEQMAS 300 TLTKDPNFKA ALAAAISGKF LQSNNHTDKC
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250|UniProtKB:Q9SUP6}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM823157 | 0.0 | KM823157.1 Salvia miltiorrhiza WRKY protein (WRKY34) mRNA, complete cds. |
Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Zhang Y, et al.
Regulation of oncogene expression in T-DNA-transformed host plant cells. PLoS Pathog., 2015. 11(1): p. e1004620 [PMID:25615824] - Geilen K,Böhmer M
Dynamic subnuclear relocalisation of WRKY40 in response to Abscisic acid in Arabidopsis thaliana. Sci Rep, 2015. 5: p. 13369 [PMID:26293691] - Geilen K,Böhmer M
Dynamic subnuclear relocalization of WRKY40, a potential new mechanism of ABA-dependent transcription factor regulation. Plant Signal Behav, 2015. 10(11): p. e1106659 [PMID:26479147] - Van Aken O, et al.
Mitochondrial and Chloroplast Stress Responses Are Modulated in Distinct Touch and Chemical Inhibition Phases. Plant Physiol., 2016. 171(3): p. 2150-65 [PMID:27208304] - Carrió-Seguí À,Romero P,Sanz A,Peñarrubia L
Interaction Between ABA Signaling and Copper Homeostasis in Arabidopsis thaliana. Plant Cell Physiol., 2016. 57(7): p. 1568-1582 [PMID:27328696] - Lu K, et al.
Overexpression of an Arabidopsis cysteine-rich receptor-like protein kinase, CRK5, enhances abscisic acid sensitivity and confers drought tolerance. J. Exp. Bot., 2016. 67(17): p. 5009-27 [PMID:27406784] - Birkenbihl RP,Kracher B,Roccaro M,Somssich IE
Induced Genome-Wide Binding of Three Arabidopsis WRKY Transcription Factors during Early MAMP-Triggered Immunity. Plant Cell, 2017. 29(1): p. 20-38 [PMID:28011690] - Lee MH,Jeon HS,Kim HG,Park OK
An Arabidopsis NAC transcription factor NAC4 promotes pathogen-induced cell death under negative regulation by microRNA164. New Phytol., 2017. 214(1): p. 343-360 [PMID:28032643] - Zhang S, et al.
The Arabidopsis Mitochondrial Protease FtSH4 Is Involved in Leaf Senescence via Regulation of WRKY-Dependent Salicylic Acid Accumulation and Signaling. Plant Physiol., 2017. 173(4): p. 2294-2307 [PMID:28250067] - Cheng P, et al.
The ERA-Related GTPase AtERG2 Associated with Mitochondria 18S RNA Is Essential for Early Embryo Development in Arabidopsis. Front Plant Sci, 2018. 9: p. 182 [PMID:29497438]
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